Gene omics information

Query gene ID 1621080_at
Gene name
Organism Vitis vinifera


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.9699.71621080_atCF568964--1e-18At1g28360ERF12 (ERF DOMAIN PROTEIN 12)S.X.H.G.
0.5475.71619018_atCF414864hypothetical protein LOC100254250-6e-2At5g54850unknown proteinS.X.H.G.
0.4868.81620877_atCF607766hypothetical protein LOC100258862-4e-5At5g66320zinc finger (GATA type) family proteinS.X.H.G.
0.4564.61620804_atCD797824hypothetical protein LOC100267227-3e-114At1g55360unknown proteinS.X.H.G.
0.4057.71613373_atBM437091hypothetical protein LOC100245626-5e-7At3g25500AFH1 (FORMIN HOMOLOGY 1)S.X.H.G.
0.3954.91609302_atCB979609similar to somatic embryogenesis receptor kinase-7e-14At1g34210SERK2 (SOMATIC EMBRYOGENESIS RECEPTOR-LIKE KINASE 2)S.X.H.G.
0.3345.71607978_atCF205852.1--1e+0At4g36791unknown proteinS.X.H.G.
0.3345.71614407_atCF403465--6e-2At1g22750unknown proteinS.X.H.G.
0.3039.41614963_atCF210984hypothetical protein LOC100266167-8e-12At1g01950armadillo/beta-catenin repeat family protein / kinesin motor family proteinS.X.H.G.
0.2734.01622185_atCF209948--3e-2At1g78915bindingS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
7.699.3GSM436398V. riparia (VR, PI588259) LD, 15h 14 days - rep2GSE17502Photoperiod regulation of grape bud dormancy
6.598.9GSM436369Seyval (SV, Seyve Villard 5-276) SD, 13h 1 days - rep3GSE17502Photoperiod regulation of grape bud dormancy
6.198.7GSM436394V. riparia (VR, PI588259) LD, 15h 7 days - rep1GSE17502Photoperiod regulation of grape bud dormancy
5.798.5GSM436367Seyval (SV, Seyve Villard 5-276) SD, 13h 1 days - rep1GSE17502Photoperiod regulation of grape bud dormancy
4.297.1GSM436417V. riparia (VR, PI588259) SD, 13h 7 days - rep3GSE17502Photoperiod regulation of grape bud dormancy
4.196.9GSM436396V. riparia (VR, PI588259) LD, 15h 7 days - rep3GSE17502Photoperiod regulation of grape bud dormancy
4.096.7GSM436350Seyval (SV, Seyve Villard 5-276) LD, 15h 3 days - rep2GSE17502Photoperiod regulation of grape bud dormancy
3.996.6GSM436371Seyval (SV, Seyve Villard 5-276) SD, 13h 3 days - rep2GSE17502Photoperiod regulation of grape bud dormancy
3.996.6GSM436348Seyval (SV, Seyve Villard 5-276) LD, 15h 1 days - rep3GSE17502Photoperiod regulation of grape bud dormancy
3.896.4GSM436425V. riparia (VR, PI588259) SD, 13h 28 days - rep2GSE17502Photoperiod regulation of grape bud dormancy
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.085e-6501611910_s_atAY395745.1similar to putative ethylene response factor ERF3b-9e-14At3g15210ERF4 (ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 4)C.G.S.X.
0.075e-6501609990_atCB009298similar to putative ethylene response factor ERF3b-1e-13At3g15210ERF4 (ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 4)C.G.S.X.
0.043e-4441621314_s_atCB347113hypothetical protein LOC100253630 /// hypothetical protein LOC100261438-2e-10At4g39780AP2 domain-containing transcription factor, putativeC.G.S.X.
0.043e-4441620853_atCB347113--2e-10At4g39780AP2 domain-containing transcription factor, putativeC.G.S.X.
0.032e-2381622386_atBQ794629hypothetical protein LOC100264172-9e-3At5g44210ERF9 (ERF DOMAIN PROTEIN 9)C.G.S.X.
0.062e-2381616198_atCF405950hypothetical protein LOC100242144-1e-7At1g28370ERF11 (ERF DOMAIN PROTEIN 11)C.G.S.X.
0.033e-1341618661_s_atCF518549hypothetical protein LOC100254504-1e-1At3g23240ERF1 (ETHYLENE RESPONSE FACTOR 1)C.G.S.X.
0.011e+0321618468_atCB969705hypothetical protein LOC100260199-8e-1At3g57390AGL18C.G.S.X.
0.081e+0321617671_s_atAY395744.1hypothetical protein LOC100248784-2e-5At3g15210ERF4 (ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 4)C.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.181e-1893Arabidopsis thalianaAt1g28360839732ERF12 (ERF DOMAIN PROTEIN 12)encodes a member of the ERF (ethylene response factor) subfamily B-1 of ERF/AP2 transcription factor family (ERF12). The protein contains one AP2 domain. There are 15 members in this subfamily including ATERF-3, ATERF-4, ATERF-7, and leafy petiole.---C.G.S.X.
0.241e-344Glycine maxGma.2176.1.S1_atBM731850--4e-16At1g28370ERF11 (ERF DOMAIN PROTEIN 11)C.G.S.X.
0.048e+030Hordeum vulgareEBem06_SQ002_J24_atEBem06_SQ002_J24--8e-1At2g43360BIO2 (BIOTIN AUXOTROPH 2)C.G.S.X.
0.032e+034Oryza sativaOs11g02029009639.m00919--2e+1At4g24080ALL1 (Aldolase like)C.G.S.X.
0.236e-1581Populus trichocarpaPtp.5913.1.S1_s_atCV244093AP2/ERF domain-containing transcription factor-2e-15At1g28360ERF12 (ERF DOMAIN PROTEIN 12)C.G.S.X.
0.063e-136Triticum aestivumTaAffx.107252.1.S1_atCA703600--2e+0At4g30410transcription factorC.G.S.X.
0.062e+032Zea maysZm.12317.1.S1_atAY106969.1ethylene-responsive transcription factor 4-2e-12At5g44210ERF9 (ERF DOMAIN PROTEIN 9)C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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