CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID 1621041_at

Gene name hypothetical protein LOC100251391

Organism Vitis vinifera

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.73 90.8 1621041_at BQ794656 hypothetical protein LOC100251391 - 2e-5 At4g30200 - S.X. H.G.
0.77 92.3 1619116_at CD712784 hypothetical protein LOC100265937 - 2e-12 At3g20560 ATPDIL5-3 (PDI-LIKE 5-3) S.X. H.G.
0.71 89.5 1609991_at CF373199 hypothetical protein LOC100267498 - 2e+0 At3g61111 structural constituent of ribosome S.X. H.G.
0.44 64.1 1621304_at CF415169 hypothetical protein LOC100250891 - 3e+0 At5g66170 - S.X. H.G.
0.35 48.5 1606924_a_at CF518716 similar to UBC9 (UBIQUITIN CONJUGATING ENZYME 9); ubiquitin-protein ligase - 8e-86 At5g41700 UBC8 (UBIQUITIN CONJUGATING ENZYME 8) S.X. H.G.
0.22 25.6 1616391_s_at CD802476 hypothetical protein LOC100261930 - 3e-51 At2g27960 CKS1 (CYCLIN-DEPENDENT KINASE-SUBUNIT 1) S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
3.0 94.2 GSM147719 Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 48 h post inoculation 48
3.0 94.2 GSM147673 Vitis vinifera 'Cabernet sauvignon' infected w/ powdery mildew (Erysiphe necator) conidiospores 4 h post inoculation 2
3.0 94.2 GSM147678 Vitis vinifera 'Cabernet sauvignon' infected w/ powdery mildew (Erysiphe necator) conidiospores 0 h post inoculation 7
2.8 93.4 GSM147700 Vitis vinifera 'Cabernet sauvignon' mock inoculated at 24 h post inoculation 29
2.7 93.0 GSM147679 Vitis vinifera 'Cabernet sauvignon' infected w/ powdery mildew (Erysiphe necator) conidiospores 4 h post inoculation 8
2.6 92.5 GSM147691 Vitis vinifera 'Cabernet sauvignon' mock inoculated at 4 h post inoculation 20
2.5 91.9 GSM147743 Vitis aestivalis 'Norton ' mock inoculated at 48 h post inoculation 72
2.4 91.3 GSM147718 Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 24 h post inoculation 47
2.4 91.3 GSM147697 Vitis vinifera 'Cabernet sauvignon' mock inoculateds at 4 h post inoculation 26
2.4 91.3 GSM147714 Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 0 h post inoculation 43
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.03 1e+0 32 1620576_at CD800420 hypothetical protein LOC100246757 - 7e-5 At1g27370 squamosa promoter-binding protein-like 10 (SPL10) C.G. S.X.
0.03 1e+0 32 1613118_at CF415479 hypothetical protein LOC100259032 - 4e+0 At5g23600 tRNA 2'phosphotransferase, putative C.G. S.X.
0.02 1e+0 32 1612516_at CB976044 hypothetical protein LOC100252647 - 8e-9 At4g39400 BRI1 (BRASSINOSTEROID INSENSITIVE 1) C.G. S.X.
0.03 1e+0 32 1610483_at CB971914 hypothetical protein LOC100242187 - 3e-1 At3g06870 proline-rich family protein C.G. S.X.
0.03 1e+0 32 1609078_a_at BQ794194 hypothetical protein LOC100251960 - 3e-1 At4g27120 unknown protein C.G. S.X.
0.02 5e+0 30 1622877_at CF514743 hypothetical protein LOC100244334 - 2e+0 At1g70400 - C.G. S.X.
0.02 5e+0 30 1620747_at CF210152 hypothetical protein LOC100245397 - 3e-29 At4g08900 arginase C.G. S.X.
0.02 5e+0 30 1620222_x_at AJ237984.1 proline-rich cell wall protein-like /// ripening-induced protein 1-like - 6e-1 Atcg00360 - C.G. S.X.
0.03 5e+0 30 1620221_at CF517910 - - 1e+0 At5g37440 DNAJ heat shock N-terminal domain-containing protein C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.05 2e-5 50 Arabidopsis thaliana At4g30200 829143 - Encodes a protein with similarity to VRN5 and VIN3.Contains both a fibronectin III and PHD finger domain. VEL1 is a part of a polycomb repressive complex (PRC2) that is involved in epigenetic silencing of the FLC flowering locus. - - - C.G. S.X.
0.04 1e-1 38 Glycine max GmaAffx.18620.1.S1_at BI892872 - - 4e-15 At2g38320 unknown protein C.G. S.X.
0.05 4e-5 48 Hordeum vulgare Contig8718_at Contig8718 - - 7e+0 Atmg00150 - C.G. S.X.
0.03 2e+0 34 Oryza sativa Os06g0681000 AK062780.1 - Hypothetical protein 1e+0 At5g08185 MIR162A (MICRORNA 162A) C.G. S.X.
0.15 3e-17 89 Populus trichocarpa PtpAffx.11683.1.A1_at CK093713 hypothetical protein - 1e-13 At4g30200 - C.G. S.X.
0.03 7e-5 48 Triticum aestivum Ta.7238.1.S1_at CK169511 - - 7e-1 At3g24440 VRN5 (VERNALIZATION 5) C.G. S.X.
0.03 2e+0 32 Zea mays Zm.14539.1.A1_at AY108777.1 R2R3MYB-domain protein - 7e-8 At3g12720 ATMYB67 (MYB DOMAIN PROTEIN 67) C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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