Gene omics information

Query gene ID	1621034_at
Gene name	hypothetical protein LOC100244738 /// similar to phosphoenolpyruvate carboxykinase /// hypothetical protein LOC100257809
Organism	Vitis vinifera

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.57	79.8	1621034_at	CF406031	hypothetical protein LOC100244738 /// similar to phosphoenolpyruvate carboxykinase /// hypothetical protein LOC100257809	-	4e-110	At4g37870	PCK1 (PHOSPHOENOLPYRUVATE CARBOXYKINASE 1)	S.X.	H.G.	Please select
0.77	92.3	1607883_at	CB969241	hypothetical protein LOC100255480	-	5e+0	At5g49215	glycoside hydrolase family 28 protein / polygalacturonase (pectinase) family protein	S.X.	H.G.	Please select
0.67	87.9	1619862_at	CB979196	hypothetical protein LOC100251016	-	3e-1	At4g32470	ubiquinol-cytochrome C reductase complex 14 kDa protein, putative	S.X.	H.G.	Please select
0.63	84.3	1622096_at	BQ793294	hypothetical protein LOC100243077	-	4e+0	At3g21490	copper-binding family protein	S.X.	H.G.	Please select
0.59	80.6	1621490_at	CF212781	hypothetical protein LOC100256024	-	4e-3	At5g48350	nucleic acid binding	S.X.	H.G.	Please select
0.57	79.8	1610428_at	CD012983	hypothetical protein LOC100263040	-	2e-4	At1g32090	early-responsive to dehydration protein-related / ERD protein-related	S.X.	H.G.	Please select
0.50	72.7	1618401_at	CF210173	hypothetical protein LOC100255480	-	6e-19	At2g47010	unknown protein	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
9.0	99.5	GSM287899	Red soft berry C13 from plant 1 cluster proximal position, biological rep 2	GSE11406	Expression data in individual grape berries during ripening initation
8.8	99.5	GSM287903	Red soft berry A7 from plant 2 cluster distal position, biological rep 1	GSE11406	Expression data in individual grape berries during ripening initation
8.0	99.3	GSM287900	Red soft berry C15 from plant 1 cluster distal position, biological rep 1	GSE11406	Expression data in individual grape berries during ripening initation
7.7	99.3	GSM287902	Red soft berry C30 from plant 2 cluster proximal position, biological rep 2	GSE11406	Expression data in individual grape berries during ripening initation
7.3	99.2	GSM287904	Red soft berry C31 from plant 2 cluster distal position, biological rep 2	GSE11406	Expression data in individual grape berries during ripening initation
7.1	99.1	GSM287901	Red soft berry C16 from plant 1 cluster distal position, biological rep 2	GSE11406	Expression data in individual grape berries during ripening initation
7.0	99.1	GSM287897	Red soft berry C29 from plant 2 cluster proximal position, biological rep 1	GSE11406	Expression data in individual grape berries during ripening initation
6.9	99.1	GSM287898	Red soft berry B14 from plant 1 cluster proximal position, biological rep 1	GSE11406	Expression data in individual grape berries during ripening initation
6.8	99.0	GSM287892	Pink soft berry C11 from plant 1 cluster distal position, biological rep 1	GSE11406	Expression data in individual grape berries during ripening initation
6.5	98.9	GSM287896	Pink soft berry C27 from plant 2 cluster distal position, biological rep 2	GSE11406	Expression data in individual grape berries during ripening initation

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.09	1e-51	202	1617265_a_at	CF603093	hypothetical protein LOC100244738 /// similar to phosphoenolpyruvate carboxykinase	-	2e-52	At5g65690	PCK2 (PHOSPHOENOLPYRUVATE CARBOXYKINASE 2)	C.G.	S.X.	Please select
0.09	1e-51	202	1616630_at	CF603093	similar to phosphoenolpyruvate carboxykinase	-	2e-52	At5g65690	PCK2 (PHOSPHOENOLPYRUVATE CARBOXYKINASE 2)	C.G.	S.X.	Please select
0.04	5e-11	67	1613673_at	CF215004	hypothetical protein LOC100255721	-	3e-10	At5g09620	octicosapeptide/Phox/Bem1p (PB1) domain-containing protein	C.G.	S.X.	Please select
0.03	1e-8	59	1617919_at	CF605842	hypothetical protein LOC100261876	-	2e+0	At4g26830	catalytic/ cation binding / hydrolase, hydrolyzing O-glycosyl compounds	C.G.	S.X.	Please select
0.03	1e-8	59	1614910_at	CF604623	hypothetical protein LOC100262364	-	6e+0	At5g48580	FKBP15-2	C.G.	S.X.	Please select
0.03	2e-7	56	1621808_s_at	CF215238	hypothetical protein LOC100264533	-	2e-3	At4g37300	MEE59 (maternal effect embryo arrest 59)	C.G.	S.X.	Please select
0.03	2e-7	56	1621625_s_at	CF513375	hypothetical protein LOC100264067	-	5e-10	At4g22360	SWIB complex BAF60b domain-containing protein	C.G.	S.X.	Please select
0.03	2e-7	56	1619379_at	CF604687	hypothetical protein LOC100266779	-	3e-7	At1g12500	phosphate translocator-related	C.G.	S.X.	Please select
0.03	2e-7	56	1616984_at	CD798634	hypothetical protein LOC100258748	-	1e-7	At2g36900	MEMB11 (MEMBRIN 11)	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.30	4e-110	398	Arabidopsis thaliana	At4g37870	829943	PCK1 (PHOSPHOENOLPYRUVATE CARBOXYKINASE 1)	Encodes a putative phosphoenolpyruvate carboxykinase (ATP-dependent).	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.41	1e-95	351	Glycine max	GmaAffx.65693.2.S1_s_at	CA799713	-	-	6e-57	At4g37870	PCK1 (PHOSPHOENOLPYRUVATE CARBOXYKINASE 1)	C.G.	S.X.	Please select
0.25	9e-45	180	Hordeum vulgare	Contig6435_at	Contig6435	-	-	4e-49	At4g37870	PCK1 (PHOSPHOENOLPYRUVATE CARBOXYKINASE 1)	C.G.	S.X.	Please select
0.25	5e-68	260	Oryza sativa	Os03g0255500	AK102392.1	-	Phosphoenolpyruvate carboxykinase [ATP] (EC4.1.1.49) (PEP carboxykinase) (Phosphoenolpyruvatecarboxylase) (PEPCK)	2e-73	At4g37870	PCK1 (PHOSPHOENOLPYRUVATE CARBOXYKINASE 1)	C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.40	4e-154	545	Populus trichocarpa	PtpAffx.201970.1.S1_s_at	pmrna3934	hypothetical protein	-	0	At4g37870	PCK1 (PHOSPHOENOLPYRUVATE CARBOXYKINASE 1)	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.23	1e-26	121	Triticum aestivum	Ta.13280.1.S1_a_at	BG907348	-	-	6e-30	At4g37870	PCK1 (PHOSPHOENOLPYRUVATE CARBOXYKINASE 1)	C.G.	S.X.	Please select
0.19	4e-31	135	Zea mays	Zm.4165.1.A1_at	AB018744.1	phosphoenolpyruvate carboxykinase	-	1e-25	At4g37870	PCK1 (PHOSPHOENOLPYRUVATE CARBOXYKINASE 1)	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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