Gene omics information

Query gene ID	1620925_at
Gene name	hypothetical protein LOC100264419
Organism	Vitis vinifera

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.91	98.8	1620925_at	CF209359	hypothetical protein LOC100264419	-	2e-1	Atmg01020	-	S.X.	H.G.	Please select
0.83	94.6	1620051_at	CF211598	-	-	3e+0	Atmg00480	-	S.X.	H.G.	Please select
0.57	79.8	1612361_at	CF202732.1	-	-	3e-58	At5g42020	BIP2	S.X.	H.G.	Please select
0.56	79.4	1621701_at	BQ794940	hypothetical LOC100245420	-	1e+0	At5g38320	unknown protein	S.X.	H.G.	Please select
0.46	66.5	1608451_at	CF205526.1	-	-	5e-22	At3g25220	FKBP15-1	S.X.	H.G.	Please select
0.26	32.0	1609341_s_at	CF202467.1	hypothetical protein LOC100265359	-	2e-3	At5g40630	ubiquitin family protein	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
13.4	99.8	GSM147741	Vitis aestivalis 'Norton ' mock inoculated at 12 h post inoculation	70
12.2	99.8	GSM147723	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation	52
12.0	99.8	GSM147735	Vitis aestivalis 'Norton ' mock inoculated at 12 h post inoculation	64
11.7	99.7	GSM147722	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation	51
11.6	99.7	GSM147716	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation	45
11.1	99.7	GSM147740	Vitis aestivalis 'Norton ' mock inoculated at 8 h post inoculation	69
8.2	99.4	GSM147729	Vitis aestivalis 'Norton ' mock inoculated at 12 h post inoculation	58
7.5	99.2	GSM147717	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation	46
7.3	99.2	GSM147721	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 4 h post inoculation	50
6.5	98.9	GSM147739	Vitis aestivalis 'Norton ' mock inoculated at 4 h post inoculation	68

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.43	1e-151	533	1617349_at	CF203026.1	hypothetical protein LOC100264419	-	4e-1	Atmg01020	-	C.G.	S.X.	Please select
0.03	3e-1	34	1615705_s_at	CA816158	hypothetical protein LOC100266754	-	1e-16	At3g10370	SDP6 (SUGAR-DEPENDENT 6)	C.G.	S.X.	Please select
0.01	3e-1	34	1615352_s_at	CB972821	hypothetical protein LOC100248779	-	5e-138	At4g13930	SHM4 (serine hydroxymethyltransferase 4)	C.G.	S.X.	Please select
0.03	3e-1	34	1612241_at	CF202625.1	-	-	3e-85	At4g13930	SHM4 (serine hydroxymethyltransferase 4)	C.G.	S.X.	Please select
0.04	3e-1	34	1611727_at	CB912607	-	-	5e+0	At5g26667	PYR6	C.G.	S.X.	Please select
0.03	3e-1	34	1609981_at	CF207945	hypothetical protein LOC100247386	-	2e-11	At5g20910	zinc finger (C3HC4-type RING finger) family protein	C.G.	S.X.	Please select
0.03	1e+0	32	1609616_at	CB001456	-	-	1e+0	At2g18530	protein kinase family protein	C.G.	S.X.	Please select
0.03	1e+0	32	1608909_at	CF371706	hypothetical protein LOC100256207	-	3e-1	At5g65030	unknown protein	C.G.	S.X.	Please select
0.04	5e+0	30	1622796_at	CF208469	hypothetical protein LOC100247561	-	2e-5	At5g05920	DHS (DEOXYHYPUSINE SYNTHASE)	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.04	2e-1	36	Arabidopsis thaliana	Atmg01020	-	-	hypothetical protein	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.03	1e+0	34	Glycine max	GmaAffx.21027.1.S1_at	BI969850	-	-	3e-1	At4g36570	ATRL3 (ARABIDOPSIS RAD-LIKE 3)	C.G.	S.X.	Please select
0.04	8e-6	50	Hordeum vulgare	Contig17038_at	Contig17038	-	-	3e-2	At5g63140	ATPAP29 (ARABIDOPSIS THALIANA PURPLE ACID PHOSPHATASE 29)	C.G.	S.X.	Please select
0.03	1e-1	38	Oryza sativa	Os09g0295901	9637.m00965	-	-	1e+0	At5g46300	unknown protein	C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.07	9e-2	38	Populus trichocarpa	PtpAffx.214612.1.S1_at	pmrna28393	hypothetical protein	-	2e-2	At2g30860	ATGSTF9 (GLUTATHIONE S-TRANSFERASE PHI 9)	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.06	4e-3	42	Triticum aestivum	Ta.10622.1.A1_at	BQ166133	-	-	9e-7	At5g63140	ATPAP29 (ARABIDOPSIS THALIANA PURPLE ACID PHOSPHATASE 29)	C.G.	S.X.	Please select
0.05	7e-6	50	Zea mays	Zm.9854.2.A1_at	CA452719	-	-	4e-7	At5g63140	ATPAP29 (ARABIDOPSIS THALIANA PURPLE ACID PHOSPHATASE 29)	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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