Gene omics information

Query gene ID 1620815_at
Gene name
Organism Vitis vinifera


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.8394.61620815_atCF568885--1e-15At1g45230defective chloroplasts and leaves protein-related / DCL protein-relatedS.X.H.G.
0.6787.91608467_atCD003740--8e-22At1g17220FUG1 (fu-gaeri1)S.X.H.G.
0.4666.51610514_atAF176655.1ripening induced protein-2e-1At4g33750-S.X.H.G.
0.4361.51617585_atCD005877--2e-11At3g14930HEME1S.X.H.G.
0.2734.01618102_atCF415084--7e-37At2g18710SCY1 (SecY Homolog 1)S.X.H.G.
0.2530.51613502_atCA812857--6e-6At2g34460flavin reductase-relatedS.X.H.G.
Click here to hide the above table.


Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
8.799.5GSM147675Vitis vinifera 'Cabernet sauvignon' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation4
5.098.0GSM147691Vitis vinifera 'Cabernet sauvignon' mock inoculated at 4 h post inoculation20
4.096.7GSM147690Vitis vinifera 'Cabernet sauvignon' mock inoculated at 0 h post inoculation19
3.896.4GSM147673Vitis vinifera 'Cabernet sauvignon' infected w/ powdery mildew (Erysiphe necator) conidiospores 4 h post inoculation2
3.896.4GSM147674Vitis vinifera 'Cabernet sauvignon' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation3
3.595.7GSM436369Seyval (SV, Seyve Villard 5-276) SD, 13h 1 days - rep3GSE17502Photoperiod regulation of grape bud dormancy
3.395.2GSM436368Seyval (SV, Seyve Villard 5-276) SD, 13h 1 days - rep2GSE17502Photoperiod regulation of grape bud dormancy
3.194.6GSM436349Seyval (SV, Seyve Villard 5-276) LD, 15h 3 days - rep1GSE17502Photoperiod regulation of grape bud dormancy
3.094.2GSM436371Seyval (SV, Seyve Villard 5-276) SD, 13h 3 days - rep2GSE17502Photoperiod regulation of grape bud dormancy
3.094.2GSM436413V. riparia (VR, PI588259) SD, 13h 3 days - rep2GSE17502Photoperiod regulation of grape bud dormancy
Click here to hide the above table.


Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.175e-401631612992_atCB343071--3e-13At1g45230defective chloroplasts and leaves protein-related / DCL protein-relatedC.G.S.X.
0.101e-211011620024_s_atCF511252hypothetical protein LOC100245587-4e-9At1g45230defective chloroplasts and leaves protein-related / DCL protein-relatedC.G.S.X.
0.118e-5461616114_atCF372919hypothetical protein LOC100252324-4e-11At1g45230defective chloroplasts and leaves protein-related / DCL protein-relatedC.G.S.X.
0.037e-2361620237_atCF204229.1--1e+0At1g01620PIP1C (PLASMA MEMBRANE INTRINSIC PROTEIN 1C)C.G.S.X.
0.037e-2361613621_s_atCD721086hypothetical protein LOC100246359-3e-1At5g58412-C.G.S.X.
0.037e-2361611021_atCD721086--3e-1At5g58412-C.G.S.X.
0.023e-1341612193_atCF510775hypothetical protein LOC100257408-8e-53At1g20540transducin family protein / WD-40 repeat family proteinC.G.S.X.
0.031e+0321613922_s_atCA809290hypothetical protein LOC100249812-1e+0At3g22970unknown proteinC.G.S.X.
0.035e+0301621220_atCB919187hypothetical protein LOC100242337-4e+0At3g25719unknown proteinC.G.S.X.
Click here to hide the above table.



Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.081e-1583Arabidopsis thalianaAt1g45230841096defective chloroplasts and leaves protein-related / DCL protein-relatedF:molecular_function unknown;P:biological_process unknown;C:chloroplast;POB---C.G.S.X.
0.092e-1169Glycine maxGma.7276.1.S1_atCD394605--2e-31At1g45230defective chloroplasts and leaves protein-related / DCL protein-relatedC.G.S.X.
0.182e-961Hordeum vulgareContig15347_atContig15347--3e-2At1g45230defective chloroplasts and leaves protein-related / DCL protein-relatedC.G.S.X.
0.158e-342Oryza sativaOs02g0766000AK067075.1-DCL protein, chloroplast precursor (Defectivechloroplasts and leaves protein)6e-7At1g45230defective chloroplasts and leaves protein-related / DCL protein-relatedC.G.S.X.
0.227e-24111Populus trichocarpaPtpAffx.99473.1.S1_a_atCV266347hypothetical protein-4e-20At1g45230defective chloroplasts and leaves protein-related / DCL protein-relatedC.G.S.X.
0.213e-446Triticum aestivumTaAffx.98918.1.A1_atCK215441--8e-5At1g45230defective chloroplasts and leaves protein-related / DCL protein-relatedC.G.S.X.
0.037e+030Zea maysZmAffx.957.1.A1_atAI833524--3e+0At2g40995-C.G.S.X.
Click here to hide the above table.


Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
Click here to hide the above table.


Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
Click here to hide the above table.



Back to the CoP portal site

Back to the KAGIANA project homepage