Gene omics information

Query gene ID	1620734_at
Gene name	hypothetical protein LOC100246175
Organism	Vitis vinifera

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.67	87.9	1620734_at	CD799694	hypothetical protein LOC100246175	-	4e+0	At4g03827	unknown protein	S.X.	H.G.	Please select
0.46	66.5	1615633_at	CA813996	hypothetical protein LOC100243547	-	1e-7	At2g03550	hydrolase	S.X.	H.G.	Please select
0.30	39.4	1617846_at	CF210020	hypothetical protein LOC100242395	-	2e-47	At3g57870	SCE1 (SUMO CONJUGATION ENZYME 1)	S.X.	H.G.	Please select
0.26	32.0	1622760_at	CD719223	hypothetical protein LOC100266427	-	1e+0	At3g61920	unknown protein	S.X.	H.G.	Please select
0.13	13.3	1619688_x_at	CF204108.1	-	-	9e-1	At4g35280	zinc finger (C2H2 type) family protein	S.X.	H.G.	Please select
0.11	11.3	1620869_at	BQ792836	-	-	2e-8	At5g13190	-	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
9.7	99.6	GSM147717	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation	46
7.5	99.2	GSM147716	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation	45
7.0	99.1	GSM147734	Vitis aestivalis 'Norton ' mock inoculated at 8 h post inoculation	63
7.0	99.1	GSM147735	Vitis aestivalis 'Norton ' mock inoculated at 12 h post inoculation	64
6.3	98.8	GSM147718	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 24 h post inoculation	47
5.5	98.4	GSM147737	Vitis aestivalis 'Norton ' mock inoculated at 48 h post inoculation	66
5.3	98.2	GSM147729	Vitis aestivalis 'Norton ' mock inoculated at 12 h post inoculation	58
5.1	98.1	GSM147719	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 48 h post inoculation	48
4.7	97.7	GSM147714	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 0 h post inoculation	43
4.5	97.5	GSM147736	Vitis aestivalis 'Norton ' mock inoculated at 24 h post inoculation	65

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.02	5e-3	40	1620208_at	CF213681	hypothetical protein LOC100258803	-	5e-27	At5g15630	IRX6	C.G.	S.X.	Please select
0.03	1e+0	32	1619884_at	CD005438	-	-	9e-2	At5g11260	HY5 (ELONGATED HYPOCOTYL 5)	C.G.	S.X.	Please select
0.02	1e+0	32	1619446_at	CB001188	-	-	8e+0	At5g05598	-	C.G.	S.X.	Please select
0.03	1e+0	32	1616110_at	CD005438	-	-	9e-2	At5g11260	HY5 (ELONGATED HYPOCOTYL 5)	C.G.	S.X.	Please select
0.02	1e+0	32	1615637_at	CB001188	-	-	8e+0	At5g05598	-	C.G.	S.X.	Please select
0.02	1e+0	32	1609202_at	CF209030	hypothetical protein LOC100259640	-	7e-3	At2g29420	ATGSTU7 (ARABIDOPSIS THALIANA GLUTATHIONE S-TRANSFERASE TAU 7)	C.G.	S.X.	Please select
0.03	4e+0	30	1622203_at	BQ798691	hypothetical protein LOC100255885	-	1e+0	At3g45470	zinc finger protein-related	C.G.	S.X.	Please select
0.03	4e+0	30	1620262_at	CB349791	-	-	3e+0	At4g14272	-	C.G.	S.X.	Please select
0.02	4e+0	30	1620186_at	CF511359	-	-	7e-1	At5g65390	AGP7	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.06	4e+0	32	Arabidopsis thaliana	At4g03827	6240710	unknown protein	F:unknown;P:unknown;C:unknown	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.04	3e-1	36	Glycine max	GmaAffx.2280.1.S1_at	AI495055	-	-	7e-14	At1g16430	surfeit locus protein 5 family protein / SURF5 family protein	C.G.	S.X.	Please select
0.04	7e+0	30	Hordeum vulgare	Contig26476_at	Contig26476	-	-	3e+0	At1g61065	unknown protein	C.G.	S.X.	Please select
0.04	2e+0	34	Oryza sativa	Os05g0327401	9633.m02359	-	-	8e+0	Atmg00240	-	C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.04	3e-1	36	Populus trichocarpa	PtpAffx.224889.1.S1_at	pmrna43797	hypothetical protein	-	4e+0	At5g34830	unknown protein	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.05	1e+0	34	Triticum aestivum	TaAffx.8480.1.S1_at	CA624685	-	-	3e-13	At5g52200	unknown protein	C.G.	S.X.	Please select
0.03	6e+0	30	Zea mays	ZmAffx.695.1.A1_at	AI737430	hypothetical protein LOC100192562	-	2e-1	At3g45248	-	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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