CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID 1620520_s_at

Gene name hypothetical protein LOC100252105

Organism Vitis vinifera

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.91 98.8 1620520_s_at BQ797142 hypothetical protein LOC100252105 - 2e-23 At3g62600 ATERDJ3B S.X. H.G.
0.50 72.7 1618480_s_at CF210842 hypothetical protein LOC100252210 - 7e-31 At2g41490 GPT (UDP-GLCNAC%3ADOLICHOL+PHOSPHATE+GLCNAC-1-P+TRANSFERASE) S.X. H.G.
0.50 72.7 1618275_at BQ796511 hypothetical protein LOC100243120 - 3e-52 At1g04980 ATPDIL2-2 (PDI-LIKE 2-2) S.X. H.G.
0.32 43.1 1607337_s_at CB972941 hypothetical protein LOC100259812 - 1e-13 At1g76700 DNAJ heat shock N-terminal domain-containing protein S.X. H.G.
0.22 25.6 1608542_at CD798715 hypothetical protein LOC100258100 - 2e-2 At5g57460 unknown protein S.X. H.G.
0.20 22.4 1622052_s_at CF213694 hypothetical protein LOC100248585 - 2e-21 At4g39220 ATRER1A S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
8.2 99.4 GSM147735 Vitis aestivalis 'Norton ' mock inoculated at 12 h post inoculation 64
7.2 99.1 GSM147717 Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation 46
6.8 99.0 GSM147741 Vitis aestivalis 'Norton ' mock inoculated at 12 h post inoculation 70
6.2 98.8 GSM147715 Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 4 h post inoculation 44
6.0 98.7 GSM147734 Vitis aestivalis 'Norton ' mock inoculated at 8 h post inoculation 63
6.0 98.7 GSM147716 Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation 45
5.3 98.2 GSM147723 Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation 52
5.0 98.0 GSM147740 Vitis aestivalis 'Norton ' mock inoculated at 8 h post inoculation 69
4.8 97.8 GSM147733 Vitis aestivalis 'Norton ' mock inoculateds at 4 h post inoculation 62
4.7 97.7 GSM147711 Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation 40
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.02 4e-3 42 1615456_at CB916516 - - 3e-1 At1g04635 EMB1687 (EMBRYO DEFECTIVE 1687) C.G. S.X.
0.02 4e-3 42 1611667_at CB916516 hypothetical protein LOC100261104 - 3e-1 At1g04635 EMB1687 (EMBRYO DEFECTIVE 1687) C.G. S.X.
0.02 9e-1 34 1622218_at CB977317 similar to membrane-associated zinc metalloprotease, putative - 9e-21 At1g05140 membrane-associated zinc metalloprotease, putative C.G. S.X.
0.02 9e-1 34 1614333_at BQ798786 hypothetical protein LOC100247467 - 3e-1 At4g21190 emb1417 (embryo defective 1417) C.G. S.X.
0.01 9e-1 34 1612607_at CB349690 hypothetical protein LOC100259476 - 2e-1 At5g63650 SNRK2.5 (SNF1-RELATED PROTEIN KINASE 2.5) C.G. S.X.
0.02 9e-1 34 1606705_at CD721559 hypothetical protein LOC100265189 - 2e-5 At3g13310 DNAJ heat shock N-terminal domain-containing protein C.G. S.X.
0.02 4e+0 32 1620029_at CF512494 - - 4e+0 At1g58245 - C.G. S.X.
0.01 4e+0 32 1619235_at CB969704 hypothetical protein LOC100266132 - 3e-5 At1g15380 lactoylglutathione lyase family protein / glyoxalase I family protein C.G. S.X.
0.02 4e+0 32 1618284_at CF516397 hypothetical protein LOC100260169 - 8e-39 At3g55800 SBPASE (sedoheptulose-bisphosphatase) C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.31 2e-23 111 Arabidopsis thaliana At3g62600 825434 ATERDJ3B J domain protein localized in ER lumen. Can partially compensate for the growth defect in jem1 scj1 mutant yeast. - - - C.G. S.X.
0.39 3e-106 387 Glycine max Gma.2546.1.S1_at CA783454 - - 6e-35 At3g62600 ATERDJ3B C.G. S.X.
0.27 1e-31 137 Hordeum vulgare Contig7280_at Contig7280 - - 3e-12 At3g62600 ATERDJ3B C.G. S.X.
0.24 3e-23 111 Oryza sativa Os05g0156500 AK062718.1 - Apobec-1 binding protein 2 2e-10 At3g62600 ATERDJ3B C.G. S.X.
0.42 2e-101 371 Populus trichocarpa PtpAffx.80014.1.S1_at CV264509 hypothetical protein - 1e-24 At3g62600 ATERDJ3B C.G. S.X.
0.25 2e-29 131 Triticum aestivum Ta.8128.1.S1_x_at BQ161382 - - 4e-12 At3g62600 ATERDJ3B C.G. S.X.
0.18 5e-34 145 Zea mays Zm.5074.1.A1_at AI600716 - - 5e-14 At3g62600 ATERDJ3B C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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