Gene omics information

Query gene ID 1620424_at
Gene name hypothetical protein LOC100255217
Organism Vitis vinifera


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.5072.71620424_atCB349003hypothetical protein LOC100255217-2e-3At5g05270chalcone-flavanone isomerase family proteinS.X.H.G.
0.5577.31611091_s_atAB073014.1MYBPA1 protein-4e-13At1g22640MYB3 (MYB DOMAIN PROTEIN 3)S.X.H.G.
0.5577.31616094_atCF372451MYBPA1 protein-5e-8At1g18570MYB51 (MYB DOMAIN PROTEIN 51)S.X.H.G.
0.5072.71615542_atCF415517hypothetical protein LOC100245973-4e+0At4g26288-S.X.H.G.
0.3345.71619642_atCF512453hypothetical protein LOC100241575-3e-28At3g10340PAL4 (Phenylalanine ammonia-lyase 4)S.X.H.G.
0.3345.71615295_atCF373832hypothetical protein LOC100259092-4e-1At4g08190Ras-related GTP-binding protein, putativeS.X.H.G.
Click here to hide the above table.


Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
4.897.8GSM436415V. riparia (VR, PI588259) SD, 13h 7 days - rep1GSE17502Photoperiod regulation of grape bud dormancy
4.397.2GSM436416V. riparia (VR, PI588259) SD, 13h 7 days - rep2GSE17502Photoperiod regulation of grape bud dormancy
3.996.6GSM436399V. riparia (VR, PI588259) LD, 15h 14 days - rep3GSE17502Photoperiod regulation of grape bud dormancy
3.796.2GSM436393V. riparia (VR, PI588259) LD, 15h 3 days - rep3GSE17502Photoperiod regulation of grape bud dormancy
3.495.5GSM436417V. riparia (VR, PI588259) SD, 13h 7 days - rep3GSE17502Photoperiod regulation of grape bud dormancy
3.495.5GSM436420V. riparia (VR, PI588259) SD, 13h 14 days - rep3GSE17502Photoperiod regulation of grape bud dormancy
3.395.2GSM436398V. riparia (VR, PI588259) LD, 15h 14 days - rep2GSE17502Photoperiod regulation of grape bud dormancy
3.194.6GSM436373Seyval (SV, Seyve Villard 5-276) SD, 13h 7 days - rep1GSE17502Photoperiod regulation of grape bud dormancy
2.993.8GSM436395V. riparia (VR, PI588259) LD, 15h 7 days - rep2GSE17502Photoperiod regulation of grape bud dormancy
2.893.4GSM436412V. riparia (VR, PI588259) SD, 13h 3 days - rep1GSE17502Photoperiod regulation of grape bud dormancy
Click here to hide the above table.


Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.283e-923371621101_s_atCF210830hypothetical protein LOC100255217-2e+0At2g15240UNC-50 family proteinC.G.S.X.
0.141e-291291615603_atCB346190--2e-1At5g11770NADH-ubiquinone oxidoreductase 20 kDa subunit, mitochondrialC.G.S.X.
0.024e-2381620877_atCF607766hypothetical protein LOC100258862-4e-5At5g66320zinc finger (GATA type) family proteinC.G.S.X.
0.024e-2381612008_atCF604996hypothetical protein LOC100243222-1e+0At4g08790nitrilase, putativeC.G.S.X.
0.024e-2381608279_atCB001634--4e-5At5g66320zinc finger (GATA type) family proteinC.G.S.X.
0.021e-1361618179_atCF568870--4e-3At1g45230defective chloroplasts and leaves protein-related / DCL protein-relatedC.G.S.X.
0.021e-1361615578_atCF207555hypothetical protein LOC100246575-3e-58At2g46230-C.G.S.X.
0.016e-1341622595_atBQ795068--4e-3At3g56860UBP1 interacting protein 2a (UBA2a)C.G.S.X.
0.026e-1341621579_atCB004209--7e+0At5g55810AtNMNAT (A. thaliana nicotinate/nicotinamide mononucleotide adenyltransferase)C.G.S.X.
Click here to hide the above table.



Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.192e-344Arabidopsis thalianaAt5g05270830409chalcone-flavanone isomerase family proteinF:chalcone isomerase activity;P:flavonoid biosynthetic process;C:cellular_component unknown;P---C.G.S.X.
0.262e-22107Glycine maxGmaAffx.93494.1.A1_s_atCF809219chalcone isomerase 4-like-3e-4At5g05270chalcone-flavanone isomerase family proteinC.G.S.X.
0.091e-1273Hordeum vulgareContig6242_atContig6242--8e-3At5g05270chalcone-flavanone isomerase family proteinC.G.S.X.
0.073e-1067Oryza sativaOs12g0115700AK099443.1-Chalcone-flavanone isomerase family protein3e+0At4g04745unknown proteinC.G.S.X.
0.293e-58226Populus trichocarpaPtp.1512.1.S1_s_atCV270596chalcone isomerase-like protein-2e-22At5g38060unknown proteinC.G.S.X.
0.035e-136Triticum aestivumTaAffx.104482.1.S1_atCB884223--4e-1At5g05710pleckstrin homology (PH) domain-containing proteinC.G.S.X.
0.042e-859Zea maysZm.4213.1.A1_atBG841480IDP158 protein /// chalcone--flavonone isomerase /// chalcone--flavonone isomerase-1e-5At5g05270chalcone-flavanone isomerase family proteinC.G.S.X.
Click here to hide the above table.


Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
Click here to hide the above table.


Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
Click here to hide the above table.



Back to the CoP portal site

Back to the KAGIANA project homepage