Gene omics information

Query gene ID 1620412_at
Gene name hypothetical protein LOC100247288
Organism Vitis vinifera


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.7792.31620412_atCF511306hypothetical protein LOC100247288-6e-10At1g36160ACC1 (ACETYL-COENZYME A CARBOXYLASE 1)S.X.H.G.
0.5577.31614440_atBQ7969223-deoxy-D-arabino-heptulosonate 7-phosphate synthase-2e-53At4g39980DHS1 (3-DEOXY-D-ARABINO-HEPTULOSONATE 7-PHOSPHATE SYNTHASE 1)S.X.H.G.
0.4464.11615742_atCB9706705-enolpyruvylshikimate-3-phosphate synthase-8e-121At2g453003-phosphoshikimate 1-carboxyvinyltransferase / 5-enolpyruvylshikimate-3-phosphate / EPSP synthaseS.X.H.G.
0.3141.31618362_s_atCF200684.1hypothetical protein LOC100255189-2e-74At1g10670ACLA-1S.X.H.G.
0.1920.91610068_atCD711769hypothetical protein LOC100252154-2e-19At2g36670aspartyl protease family proteinS.X.H.G.
0.066.81609392_s_atCF210020hypothetical protein LOC100242395-2e-47At3g57870SCE1 (SUMO CONJUGATION ENZYME 1)S.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
7.799.3GSM299459D_i_rep1GSE11857Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genes
6.598.9GSM299460D_i_rep2GSE11857Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genes
5.998.6GSM299456C_i_rep1GSE11857Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genes
4.797.7GSM299454B_i_rep2GSE11857Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genes
4.297.1GSM299453B_i_rep1GSE11857Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genes
4.297.1GSM299457C_i_rep2GSE11857Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genes
3.796.2GSM147718Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 24 h post inoculation47
3.595.7GSM299462D_ni_rep1GSE11857Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genes
3.395.2GSM299455C_ni_rep2GSE11857Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genes
3.094.2GSM299458D_ni_rep2GSE11857Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genes
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.026e-1341619624_atCA813734--6e+0At5g60230SEN2 (splicing endonuclease 2)C.G.S.X.
0.013e+0321619744_atCF208885hypothetical protein LOC100249117-2e-94At1g18070EF-1-alpha-related GTP-binding protein, putativeC.G.S.X.
0.023e+0321617015_atCF209172hypothetical protein LOC100251082-3e-10At3g07010pectate lyase family proteinC.G.S.X.
0.023e+0321616627_atCA809160hypothetical protein LOC100255039-6e+0At5g02280synbindin, putativeC.G.S.X.
0.023e+0321616116_atCF604141hypothetical protein LOC100268134-2e-21At5g20250DIN10 (DARK INDUCIBLE 10)C.G.S.X.
0.023e+0321614153_atCF207979hypothetical protein LOC100267681-6e-43At5g13110G6PD2 (GLUCOSE-6-PHOSPHATE DEHYDROGENASE 2)C.G.S.X.
0.023e+0321614185_atCF515676--2e+0At5g67120zinc finger (C3HC4-type RING finger) family proteinC.G.S.X.
0.023e+0321610434_atCF404432hypothetical protein LOC100244562-1e+0At5g24090acidic endochitinase (CHIB1)C.G.S.X.
0.023e+0321609340_atCF415722hypothetical protein LOC100245606-1e-7At3g24490transcription factorC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.046e-1065Arabidopsis thalianaAt1g36160840521ACC1 (ACETYL-COENZYME A CARBOXYLASE 1)Encodes acetyl-CoA carboxylase. Mutant displays uncoordinated cell divisions which are enhanced by cytokinins. Mutant also has aberrant organization of the apical region in the embryo and abnormal root and shoot development. Essential for very long chain fatty acid elongation.---C.G.S.X.
0.201e-861Glycine maxGma.6558.1.S1_s_atBU084402--2e-6At1g36160ACC1 (ACETYL-COENZYME A CARBOXYLASE 1)C.G.S.X.
0.064e-652Hordeum vulgareContig5989_s_atContig5989--6e-18At1g36180ACC2 (ACETYL-COA CARBOXYLASE 2)C.G.S.X.
0.087e-859Oryza sativaOs05g0295300AK059261.1-Acetyl-coenzyme A carboxylase (EC 6.4.1.2)2e+0At3g24280SMAP2 (small acidic protein 2)C.G.S.X.
0.354e-24113Populus trichocarpaPtp.6482.1.S1_s_atBI129616hypothetical protein-1e+0At4g36740ATHB40 (ARABIDOPSIS THALIANA HOMEOBOX PROTEIN 40)C.G.S.X.
0.022e+034Triticum aestivumTaAffx.112975.1.S1_atCA619323--2e-1At1g20110zinc finger (FYVE type) family proteinC.G.S.X.
0.054e-652Zea maysZm.264.2.A1_x_atCF012670acetyl-coenzyme A carboxylase-8e+0At5g02890transferase family proteinC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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