CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID 1620398_at

Gene name hypothetical LOC100263767

Organism Vitis vinifera

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.67 87.9 1620398_at CA810891 hypothetical LOC100263767 - 1e-3 At3g09690 hydrolase, alpha/beta fold family protein S.X. H.G.
0.80 93.6 1618432_at CB345244 hypothetical protein LOC100267315 - 6e+0 At5g13825 unknown protein S.X. H.G.
0.67 87.9 1622682_at CB001944 hypothetical protein LOC100256501 - 2e-67 At1g16720 HCF173 (high chlorophyll fluorescence phenotype 173) S.X. H.G.
0.36 50.7 1609508_at CB976923 hypothetical protein LOC100242787 - 4e-3 At5g45960 GDSL-motif lipase/hydrolase family protein S.X. H.G.
0.33 45.7 1619157_at AF359521.1 inward rectifying shaker-like K+ channel - 3e-66 At4g18290 KAT2 (POTASSIUM CHANNEL IN ARABIDOPSIS THALIANA 2) S.X. H.G.
0.32 43.1 1618107_at CF403374 hypothetical protein LOC100263831 - 1e-7 At4g25650 ACD1-LIKE (ACD1-LIKE) S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
10.6 99.7 GSM147743 Vitis aestivalis 'Norton ' mock inoculated at 48 h post inoculation 72
8.2 99.4 GSM147719 Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 48 h post inoculation 48
8.1 99.4 GSM147725 Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 48 h post inoculation 54
7.1 99.1 GSM147718 Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 24 h post inoculation 47
6.9 99.1 GSM147712 Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 24 h post inoculation 41
6.9 99.1 GSM147724 Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 24 h post inoculation 53
6.6 98.9 GSM147737 Vitis aestivalis 'Norton ' mock inoculated at 48 h post inoculation 66
6.5 98.9 GSM147731 Vitis aestivalis 'Norton ' mock inoculated at 48 h post inoculation 60
6.1 98.7 GSM147742 Vitis aestivalis 'Norton ' mock inoculated at 24 h post inoculation 71
6.1 98.7 GSM147730 Vitis aestivalis 'Norton ' mock inoculated at 24 h post inoculation 59
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.02 9e-2 36 1621639_s_at CF514133 hypothetical protein LOC100262060 - 7e-3 At5g39760 AtHB23 (ARABIDOPSIS THALIANA HOMEOBOX PROTEIN 23) C.G. S.X.
0.02 9e-2 36 1619485_at CF514133 hypothetical protein LOC100262060 - 7e-3 At5g39760 AtHB23 (ARABIDOPSIS THALIANA HOMEOBOX PROTEIN 23) C.G. S.X.
0.03 4e-1 34 1619714_at CD721565 - - 3e-1 At2g33480 ANAC041 (Arabidopsis NAC domain containing protein 41) C.G. S.X.
0.03 4e-1 34 1607036_at CD721565 - - 1e+0 At3g48460 GDSL-motif lipase/hydrolase family protein C.G. S.X.
0.03 2e+0 32 1621443_at CF517366 - - 1e+0 At1g05085 unknown protein C.G. S.X.
0.03 2e+0 32 1621253_at CD720585 - - 2e+1 At5g45710 RHA1 (ROOT HANDEDNESS 1) C.G. S.X.
0.03 2e+0 32 1615656_at CD801221 - - 3e+0 At1g26773 unknown protein C.G. S.X.
0.04 2e+0 32 1614582_at BQ799084 hypothetical protein LOC100265011 - 3e-4 At1g08450 CRT3 (CALRETICULIN 3) C.G. S.X.
0.02 2e+0 32 1614381_at CD713830 - - 9e+0 At5g54930 AT hook motif-containing protein C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.07 1e-3 44 Arabidopsis thaliana At3g09690 820126 hydrolase, alpha/beta fold family protein F:hydrolase activity;P:biological_process unknown;C:cellular_component unknown;BPOFMA - - - C.G. S.X.
0.24 1e-19 97 Glycine max GmaAffx.70193.1.S1_at BG507333 - - 3e-5 At5g02970 hydrolase, alpha/beta fold family protein C.G. S.X.
0.07 2e-7 56 Hordeum vulgare Contig10254_s_at Contig10254 - - 1e-8 At5g02970 hydrolase, alpha/beta fold family protein C.G. S.X.
0.05 4e-5 50 Oryza sativa Os03g0288300 AK100369.1 - Alpha/beta hydrolase fold domain containingprotein 3e-7 At3g09690 hydrolase, alpha/beta fold family protein C.G. S.X.
0.11 1e-7 57 Populus trichocarpa PtpAffx.213489.1.S1_s_at pmrna26366 hypothetical protein - 6e-17 At3g09690 hydrolase, alpha/beta fold family protein C.G. S.X.
0.06 9e-5 48 Triticum aestivum Ta.5533.1.S1_at CA695901 - - 2e-4 At3g09690 hydrolase, alpha/beta fold family protein C.G. S.X.
0.04 4e-5 48 Zea mays Zm.17767.1.A1_at CK371577 hypothetical protein LOC100191424 - 4e-1 At2g14365 LCR84 (Low-molecular-weight cysteine-rich 84) C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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