Gene omics information

Query gene ID 1620380_x_at
Gene name
Organism Vitis vinifera


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.9198.81620380_x_atCF203025.1--1e-1At5g38410ribulose bisphosphate carboxylase small chain 3B / RuBisCO small subunit 3B (RBCS-3B) (ATS3B)S.X.H.G.
0.5779.81609380_x_atCF203033.1--8e-10At5g38410ribulose bisphosphate carboxylase small chain 3B / RuBisCO small subunit 3B (RBCS-3B) (ATS3B)S.X.H.G.
0.5072.71612361_atCF202732.1--3e-58At5g42020BIP2S.X.H.G.
0.4666.51621187_s_atCF201896.1--8e+0At5g50345-S.X.H.G.
0.4057.71618907_x_atCF202612.1--4e+0At5g17470calmodulin-related protein, putativeS.X.H.G.
0.3548.51618973_s_atCF204369.1hypothetical protein LOC100267103-1e+0At3g61560reticulon family protein (RTNLB6)S.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
12.599.8GSM147722Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation51
8.599.4GSM147720Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 0 h post inoculation49
8.299.4GSM147742Vitis aestivalis 'Norton ' mock inoculated at 24 h post inoculation71
7.999.3GSM147727Vitis aestivalis 'Norton ' mock inoculated at 4 h post inoculation56
7.899.3GSM147723Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation52
7.799.3GSM147721Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 4 h post inoculation50
7.699.3GSM147730Vitis aestivalis 'Norton ' mock inoculated at 24 h post inoculation59
7.599.2GSM147743Vitis aestivalis 'Norton ' mock inoculated at 48 h post inoculation72
7.299.1GSM147708Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 0 h post inoculation37
7.199.1GSM147740Vitis aestivalis 'Norton ' mock inoculated at 8 h post inoculation69
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.648e-501941619608_atCF202280.1--2e-19At5g38410ribulose bisphosphate carboxylase small chain 3B / RuBisCO small subunit 3B (RBCS-3B) (ATS3B)C.G.S.X.
0.648e-501941612848_x_atCF202280.1--2e-19At5g38410ribulose bisphosphate carboxylase small chain 3B / RuBisCO small subunit 3B (RBCS-3B) (ATS3B)C.G.S.X.
0.268e-501941610124_atCA816957hypothetical protein LOC100267942-7e-12At5g38410ribulose bisphosphate carboxylase small chain 3B / RuBisCO small subunit 3B (RBCS-3B) (ATS3B)C.G.S.X.
0.422e-471861617102_atCF202285.1--2e-12At5g38410ribulose bisphosphate carboxylase small chain 3B / RuBisCO small subunit 3B (RBCS-3B) (ATS3B)C.G.S.X.
0.642e-471861609380_x_atCF203033.1--8e-10At5g38410ribulose bisphosphate carboxylase small chain 3B / RuBisCO small subunit 3B (RBCS-3B) (ATS3B)C.G.S.X.
0.607e-441741618020_x_atCB972570hypothetical protein LOC100267942-8e-4At5g38410ribulose bisphosphate carboxylase small chain 3B / RuBisCO small subunit 3B (RBCS-3B) (ATS3B)C.G.S.X.
0.211e-421711616847_s_atCA816751hypothetical protein LOC100267942-2e-12At5g38410ribulose bisphosphate carboxylase small chain 3B / RuBisCO small subunit 3B (RBCS-3B) (ATS3B)C.G.S.X.
0.207e-411651613936_x_atCF568996--8e-24At5g38410ribulose bisphosphate carboxylase small chain 3B / RuBisCO small subunit 3B (RBCS-3B) (ATS3B)C.G.S.X.
0.571e-301311621341_atCA814621--2e+0At5g42020BIP2C.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.051e-136Arabidopsis thalianaAt5g38410833828ribulose bisphosphate carboxylase small chain 3B / RuBisCO small subunit 3B (RBCS-3B) (ATS3B)F:ribulose-bisphosphate carboxylase activity;P:response to blue light, carbon utilization by fixation of carbon dioxide, response to red light, response to far red light;C:in 8 components;POB---C.G.S.X.
0.048e-134Glycine maxGmaAffx.70380.1.S1_atBM271293--8e-2At1g78150unknown proteinC.G.S.X.
0.044e+030Hordeum vulgareHVSMEf0013J20f_atHVSMEf0013J20f--3e+0At4g01925DC1 domain-containing proteinC.G.S.X.
0.042e+130Oryza sativaOsAffx.5335.2.S1_x_at---0C.G.S.X.
0.051e+130Populus trichocarpaPtpAffx.50263.1.A1_atCV252613--4e+0At4g10920KELPC.G.S.X.
0.052e+032Triticum aestivumTaAffx.109027.1.S1_x_atCA681071--9e+0At4g35660unknown proteinC.G.S.X.
0.064e+030Zea maysZm.8881.1.S1_atBM056113Hypothetical protein LOC100192858-2e+0At3g25545unknown proteinC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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