Gene omics information

Query gene ID 1620254_at
Gene name
Organism Vitis vinifera


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.6787.91620254_atCD713450--2e+0At5g12990CLE40 (CLAVATA3/ESR-RELATED 40)S.X.H.G.
0.4666.51613451_atCD718832--8e-77At3g24430HCF101 (HIGH-CHLOROPHYLL-FLUORESCENCE 101)S.X.H.G.
0.4057.71610021_atCB001944--2e-67At1g16720HCF173 (high chlorophyll fluorescence phenotype 173)S.X.H.G.
0.3650.71616091_atCD715200--5e-71At1g43670fructose-1,6-bisphosphatase, putative / D-fructose-1,6-bisphosphate 1-phosphohydrolase, putative / FBPase, putativeS.X.H.G.
0.1920.91610991_atCD718615--2e-6At1g50020unknown proteinS.X.H.G.
0.066.81615690_atCD715586--9e-10At4g12910scpl20 (serine carboxypeptidase-like 20)S.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
14.399.9GSM147690Vitis vinifera 'Cabernet sauvignon' mock inoculated at 0 h post inoculation19
12.199.8GSM147676Vitis vinifera 'Cabernet sauvignon' infected w/ powdery mildew (Erysiphe necator) conidiospores 24 h post inoculation5
8.699.5GSM147694Vitis vinifera 'Cabernet sauvignon' mock inoculated at 24 h post inoculation23
8.299.4GSM322366genotype: Chardonnay - disease type: Healthy - rep3GSE12842Gene expression in grapevine in response to Bois noir infection
7.699.3GSM147672Vitis vinifera 'Cabernet sauvignon' infected w/ powdery mildew (Erysiphe necator) conidiospores 0 h post inoculation1
6.698.9GSM147693Vitis vinifera 'Cabernet sauvignon' mock inoculated at 12 h post inoculation22
6.598.9GSM147675Vitis vinifera 'Cabernet sauvignon' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation4
6.498.9GSM147679Vitis vinifera 'Cabernet sauvignon' infected w/ powdery mildew (Erysiphe necator) conidiospores 4 h post inoculation8
6.198.7GSM147673Vitis vinifera 'Cabernet sauvignon' infected w/ powdery mildew (Erysiphe necator) conidiospores 4 h post inoculation2
6.098.7GSM147674Vitis vinifera 'Cabernet sauvignon' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation3
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.97015241616457_atCD713450hypothetical protein LOC100263581-2e+0At5g12990CLE40 (CLAVATA3/ESR-RELATED 40)C.G.S.X.
0.013e-2381607032_s_atCB345316hypothetical protein LOC100250535-2e-18At1g01060LHY (LATE ELONGATED HYPOCOTYL)C.G.S.X.
0.021e-1361611976_atCF213700hypothetical protein LOC100260879-4e-1At2g20362unknown proteinC.G.S.X.
0.035e-1341621160_atCF208890--2e-1At5g24250unknown proteinC.G.S.X.
0.022e+0321622477_atCF414040hypothetical protein LOC100261452-4e-4At3g22550senescence-associated protein-relatedC.G.S.X.
0.022e+0321619178_atCB349106hypothetical protein LOC100257853 /// hypothetical protein LOC100252432-3e-8At1g68300universal stress protein (USP) family proteinC.G.S.X.
0.032e+0321618660_atCB976465--2e+0At2g19200unknown proteinC.G.S.X.
0.022e+0321616155_atCA817917--4e+0At5g53205unknown proteinC.G.S.X.
0.012e+0321615742_atCB9706705-enolpyruvylshikimate-3-phosphate synthase-8e-121At2g453003-phosphoshikimate 1-carboxyvinyltransferase / 5-enolpyruvylshikimate-3-phosphate / EPSP synthaseC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.032e+034Arabidopsis thalianaAt5g12990831139CLE40 (CLAVATA3/ESR-RELATED 40)Member of a large family of putative ligands homologous to the Clavata3 gene. Consists of a single exon.---C.G.S.X.
0.093e-1273Glycine maxGma.2348.3.S1_atBU548288--1e+0At5g51940NRPB6AC.G.S.X.
0.039e-134Hordeum vulgareContig13447_s_atContig13447--5e+0At5g53205unknown proteinC.G.S.X.
0.029e-136Oryza sativaOs03g0686500AK099457.1-Hypothetical protein2e+0At1g07320RPL4C.G.S.X.
0.112e-32141Populus trichocarpaPtpAffx.469.1.A1_atCV270102--3e-16At1g01320tetratricopeptide repeat (TPR)-containing proteinC.G.S.X.
0.045e-446Triticum aestivumTa.6248.1.S1_x_atBJ252456--2e+0At3g14170unknown proteinC.G.S.X.
0.023e+032Zea maysZmAffx.146.1.A1_atAI66782630S ribosomal protein S31-2e-1At4g21450vesicle-associated membrane family protein / VAMP family proteinC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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