Gene omics information

Query gene ID	1620220_at
Gene name	hypothetical protein LOC100243115
Organism	Vitis vinifera

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.55	77.3	1620220_at	CB345823	hypothetical protein LOC100243115	-	7e-46	At5g54760	eukaryotic translation initiation factor SUI1, putative	S.X.	H.G.	Please select
0.61	83.2	1607335_at	CD801694	hypothetical protein LOC100245908	-	1e-20	At3g06050	PRXIIF (PEROXIREDOXIN IIF)	S.X.	H.G.	Please select
0.57	79.8	1622075_at	CD799862	-	-	2e-16	At5g20990	B73	S.X.	H.G.	Please select
0.45	64.6	1611911_at	CF212492	hypothetical protein LOC100266461	-	1e-121	At5g08530	CI51 (51 kDa subunit of complex I)	S.X.	H.G.	Please select
0.44	64.1	1615943_at	CB971749	hypothetical protein LOC100266273	-	5e-14	At1g51980	mitochondrial processing peptidase alpha subunit, putative	S.X.	H.G.	Please select
0.43	61.5	1613951_at	CF404624	hypothetical protein LOC100242676	-	1e-13	At3g06350	MEE32 (MATERNAL EFFECT EMBRYO ARREST 32)	S.X.	H.G.	Please select
0.38	53.6	1622610_at	CF413855	hypothetical protein LOC100264665	-	5e-6	At5g15090	VDAC3 (VOLTAGE DEPENDENT ANION CHANNEL 3)	S.X.	H.G.	Please select
0.36	50.7	1614881_at	CF210464	hypothetical protein LOC100261031	-	1e-153	At5g08670	ATP binding / hydrogen ion transporting ATP synthase, rotational mechanism	S.X.	H.G.	Please select
0.33	45.7	1617811_s_at	BQ794232	hypothetical protein LOC100254399	-	4e-14	At2g21870	unknown protein	S.X.	H.G.	Please select
0.31	41.3	1606432_at	CD013716	hypothetical protein LOC100242349	-	1e-4	At4g39690	unknown protein	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
2.4	91.3	GSM147743	Vitis aestivalis 'Norton ' mock inoculated at 48 h post inoculation	72
2.1	89.1	GSM147715	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 4 h post inoculation	44
2.0	88.2	GSM147719	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 48 h post inoculation	48
2.0	88.2	GSM147724	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 24 h post inoculation	53
1.9	87.2	GSM147733	Vitis aestivalis 'Norton ' mock inoculateds at 4 h post inoculation	62
1.9	87.2	GSM147731	Vitis aestivalis 'Norton ' mock inoculated at 48 h post inoculation	60
1.8	86.0	GSM147713	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 48 h post inoculation	42
1.8	86.0	GSM147716	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation	45
1.7	84.7	GSM147741	Vitis aestivalis 'Norton ' mock inoculated at 12 h post inoculation	70
1.7	84.7	GSM147723	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation	52

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.38	2e-62	238	1615944_s_at	BQ792449	hypothetical protein LOC100245122	-	2e-39	At4g27130	eukaryotic translation initiation factor SUI1, putative	C.G.	S.X.	Please select
0.27	4e-32	137	1617147_at	CF213753	hypothetical protein LOC100243506	-	1e-16	At4g27130	eukaryotic translation initiation factor SUI1, putative	C.G.	S.X.	Please select
0.03	3e-2	38	1613858_at	CB350012	hypothetical protein LOC100257511	-	8e+0	At5g38940	manganese ion binding / nutrient reservoir	C.G.	S.X.	Please select
0.02	1e-1	36	1617227_at	CD712927	-	-	1e-1	At3g17350	unknown protein	C.G.	S.X.	Please select
0.02	1e-1	36	1613403_at	CD712927	-	-	1e-1	At3g17350	unknown protein	C.G.	S.X.	Please select
0.02	2e+0	32	1622722_at	CF209124	-	-	4e-1	At4g30067	LCR63 (Low-molecular-weight cysteine-rich 63)	C.G.	S.X.	Please select
0.01	2e+0	32	1621583_at	CF404733	hypothetical protein LOC100266937	-	3e-12	At1g05850	POM1 (POM-POM1)	C.G.	S.X.	Please select
0.03	2e+0	32	1621425_at	CD004267	-	-	5e-1	At3g21080	ABC transporter-related	C.G.	S.X.	Please select
0.02	2e+0	32	1620326_at	CF202358.1	-	-	1e-1	At1g09100	RPT5B (26S proteasome AAA-ATPase subunit RPT5B)	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.45	7e-46	184	Arabidopsis thaliana	At5g54760	835566	eukaryotic translation initiation factor SUI1, putative	F:translation initiation factor activity;P:translational initiation, translation;C:cellular_component unknown;MPFOAVB	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.35	2e-56	220	Glycine max	GmaAffx.90705.1.A1_s_at	CF809069	-	-	2e-52	At4g27130	eukaryotic translation initiation factor SUI1, putative	C.G.	S.X.	Please select
0.34	5e-48	190	Hordeum vulgare	Contig2935_s_at	Contig2935	-	-	3e-14	At4g27130	eukaryotic translation initiation factor SUI1, putative	C.G.	S.X.	Please select
0.34	5e-39	163	Oryza sativa	Os05g0498400	AK058219.1	-	Translation initiation factor SUI1 family protein	7e-15	At5g54760	eukaryotic translation initiation factor SUI1, putative	C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.37	2e-108	393	Populus trichocarpa	Ptp.5003.1.S1_s_at	CF235566	hypothetical protein	-	3e-42	At5g54760	eukaryotic translation initiation factor SUI1, putative	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.39	2e-30	133	Triticum aestivum	Ta.15761.1.S1_x_at	CA486743	-	-	9e-17	At4g27130	eukaryotic translation initiation factor SUI1, putative	C.G.	S.X.	Please select
0.31	4e-39	161	Zea mays	Zm.5640.1.A1_at	CF012865	protein translation factor SUI1	-	1e-26	At4g27130	eukaryotic translation initiation factor SUI1, putative	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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