CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID 1620211_at

Gene name hypothetical protein LOC100261483

Organism Vitis vinifera

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.63 84.3 1620211_at CF513911 hypothetical protein LOC100261483 - 1e+0 At3g07565 DNA binding S.X. H.G.
0.78 92.6 1615727_at CF205417.1 hypothetical protein LOC100261981 - 9e-2 At4g31470 pathogenesis-related protein, putative S.X. H.G.
0.67 87.9 1616023_at CB979152 hypothetical protein LOC100252512 - 1e-38 At1g50140 ATP binding / ATPase/ nucleoside-triphosphatase/ nucleotide binding S.X. H.G.
0.63 84.3 1614958_at CB347627 hypothetical protein LOC100241674 - 2e-6 At5g13050 5-FCL (5-FORMYLTETRAHYDROFOLATE CYCLOLIGASE) S.X. H.G.
0.63 84.3 1622086_at CF207289 hypothetical protein LOC100265288 - 1e-1 At2g20480 unknown protein S.X. H.G.
0.40 57.7 1608770_at CF211789 - - 6e-21 At3g60620 phosphatidate cytidylyltransferase family protein S.X. H.G.
0.36 50.7 1619028_at CF205704.1 hypothetical protein LOC100248919 - 3e-26 At3g60620 phosphatidate cytidylyltransferase family protein S.X. H.G.
0.33 45.7 1615943_at CB971749 hypothetical protein LOC100266273 - 5e-14 At1g51980 mitochondrial processing peptidase alpha subunit, putative S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
4.3 97.2 GSM147735 Vitis aestivalis 'Norton ' mock inoculated at 12 h post inoculation 64
3.6 96.0 GSM147739 Vitis aestivalis 'Norton ' mock inoculated at 4 h post inoculation 68
3.4 95.5 GSM147725 Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 48 h post inoculation 54
3.2 94.9 GSM147729 Vitis aestivalis 'Norton ' mock inoculated at 12 h post inoculation 58
3.2 94.9 GSM147740 Vitis aestivalis 'Norton ' mock inoculated at 8 h post inoculation 69
3.2 94.9 GSM147711 Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation 40
3.1 94.6 GSM147731 Vitis aestivalis 'Norton ' mock inoculated at 48 h post inoculation 60
3.0 94.2 GSM147730 Vitis aestivalis 'Norton ' mock inoculated at 24 h post inoculation 59
3.0 94.2 GSM147737 Vitis aestivalis 'Norton ' mock inoculated at 48 h post inoculation 66
2.8 93.4 GSM147710 Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation 39
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.01 1e+0 32 1615787_at BQ797242 similar to elongation factor 2 - 2e-168 At1g56070 LOS1 C.G. S.X.
0.02 1e+0 32 1613399_at CF208828 hypothetical protein LOC100254049 - 3e-3 At5g42860 unknown protein C.G. S.X.
0.03 1e+0 32 1609659_at CA816821 hypothetical protein LOC100262326 - 8e-2 At4g01897 unknown protein C.G. S.X.
0.03 5e+0 30 1620210_at CF603789 hypothetical protein LOC100263087 - 3e-10 At5g26710 glutamate-tRNA ligase, putative / glutamyl-tRNA synthetase, putatuve / GluRS, putative C.G. S.X.
0.03 5e+0 30 1619358_at CB970396 - - 1e+0 At5g26260 meprin and TRAF homology domain-containing protein / MATH domain-containing protein C.G. S.X.
0.02 5e+0 30 1609109_at CB922980 hypothetical protein LOC100249946 - 3e-2 At1g05720 selenoprotein family protein C.G. S.X.
0.02 5e+0 30 1607974_at CF213553 hypothetical protein LOC100266932 - 1e-30 At3g62870 60S ribosomal protein L7A (RPL7aB) C.G. S.X.
0.01 2e+1 28 1622559_at CF606481 hypothetical LOC100244512 - 9e-22 At1g42990 ATBZIP60 (BASIC REGION/LEUCINE ZIPPER MOTIF 60) C.G. S.X.
0.02 2e+1 28 1621396_at CF514715 hypothetical protein LOC100243434 - 5e-13 At4g34000 ABF3 (ABSCISIC ACID RESPONSIVE ELEMENTS-BINDING FACTOR 3) C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.06 1e+0 34 Arabidopsis thaliana At3g07565 819946 DNA binding F:DNA binding;P:biological_process unknown;C:chloroplast;PMO - - - C.G. S.X.
0.14 2e-18 93 Glycine max Gma.1648.1.S1_at AW351060 - - 2e-4 At1g60670 - C.G. S.X.
0.03 2e+0 32 Hordeum vulgare HA22E11r_s_at HA22E11r - - 3e+0 At3g44755 unknown protein C.G. S.X.
0.02 2e+0 34 Oryza sativa Os12g0597800 AK108042.1 - HAT dimerisation domain containing protein 3e+0 At2g06500 hAT dimerisation domain-containing protein / transposase-related C.G. S.X.
0.14 3e-20 99 Populus trichocarpa PtpAffx.18731.1.A1_at CV270341 hypothetical protein - 8e-1 At1g10820 unknown protein C.G. S.X.
0.03 3e-1 36 Triticum aestivum TaAffx.54027.1.S1_at CA686656 - - 1e+0 At5g28390 RNA recognition motif (RRM)-containing protein C.G. S.X.
0.04 5e-4 44 Zea mays Zm.15375.1.S1_at BM378166 - - 2e+0 At1g60980 ATGA20OX4 (ARABIDOPSIS THALIANA GIBBERELLIN 20-OXIDASE 4) C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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