CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID 1620155_at

Gene name hypothetical protein LOC100242363

Organism Vitis vinifera

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.68 88.0 1620155_at CB969445 hypothetical protein LOC100242363 - 1e+0 At3g56970 BHLH038 S.X. H.G.
0.59 80.6 1611914_at BQ796358 hypothetical protein LOC100261398 - 2e+0 At4g14660 NRPE7 S.X. H.G.
0.52 73.9 1608722_at BQ792556 hypothetical protein LOC100252840 - 1e-1 At5g40630 ubiquitin family protein S.X. H.G.
0.52 73.9 1619977_at BQ794993 hypothetical protein LOC100251508 - 3e-27 At2g22540 SVP (SHORT VEGETATIVE PHASE) S.X. H.G.
0.50 72.7 1617568_at CF511076 hypothetical protein LOC100247517 - 1e+0 At5g07571 - S.X. H.G.
0.47 67.7 1619047_at CD012487 hypothetical protein LOC100253286 - 7e-11 At3g16980 NRPB9A S.X. H.G.
0.42 60.1 1606662_at CB979542 similar to somatic embryogenesis receptor kinase - 6e-59 At1g34210 SERK2 (SOMATIC EMBRYOGENESIS RECEPTOR-LIKE KINASE 2) S.X. H.G.
0.39 54.9 1620990_at CF511811 hypothetical protein LOC100247103 - 1e-18 At1g19330 unknown protein S.X. H.G.
0.38 53.6 1612994_at CF415215 hypothetical protein LOC100255224 - 4e-17 At1g74520 ATHVA22A S.X. H.G.
0.36 50.7 1611382_at CF212352 hypothetical protein LOC100264955 - 2e-6 At3g53850 - S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
7.1 99.1 GSM436401 V. riparia (VR, PI588259) LD, 15h 21 days - rep2 GSE17502 Photoperiod regulation of grape bud dormancy
5.5 98.4 GSM436403 V. riparia (VR, PI588259) LD, 15h 28 days - rep1 GSE17502 Photoperiod regulation of grape bud dormancy
5.3 98.2 GSM436400 V. riparia (VR, PI588259) LD, 15h 21 days - rep1 GSE17502 Photoperiod regulation of grape bud dormancy
5.2 98.2 GSM436412 V. riparia (VR, PI588259) SD, 13h 3 days - rep1 GSE17502 Photoperiod regulation of grape bud dormancy
4.9 97.9 GSM436402 V. riparia (VR, PI588259) LD, 15h 21 days - rep3 GSE17502 Photoperiod regulation of grape bud dormancy
4.2 97.1 GSM436397 V. riparia (VR, PI588259) LD, 15h 14 days - rep1 GSE17502 Photoperiod regulation of grape bud dormancy
4.1 96.9 GSM436404 V. riparia (VR, PI588259) LD, 15h 28 days - rep2 GSE17502 Photoperiod regulation of grape bud dormancy
3.8 96.4 GSM436415 V. riparia (VR, PI588259) SD, 13h 7 days - rep1 GSE17502 Photoperiod regulation of grape bud dormancy
3.7 96.2 GSM436399 V. riparia (VR, PI588259) LD, 15h 14 days - rep3 GSE17502 Photoperiod regulation of grape bud dormancy
3.5 95.7 GSM436416 V. riparia (VR, PI588259) SD, 13h 7 days - rep2 GSE17502 Photoperiod regulation of grape bud dormancy
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.03 3e-1 34 1617523_at CF209489 hypothetical protein LOC100245822 - 4e+0 At4g13690 unknown protein C.G. S.X.
0.03 1e+0 32 1621877_at CB922518 hypothetical protein LOC100241998 - 6e-6 At3g44590 60S acidic ribosomal protein P2 (RPP2D) C.G. S.X.
0.03 1e+0 32 1610211_at CB922518 - - 6e-6 At3g44590 60S acidic ribosomal protein P2 (RPP2D) C.G. S.X.
0.03 1e+0 32 1609925_at CF203692.1 - - 2e-2 At2g30080 ZIP6 C.G. S.X.
0.03 1e+0 32 1609931_at CF512273 hypothetical protein LOC100264352 - 3e-4 At2g26500 cytochrome b6f complex subunit (petM), putative C.G. S.X.
0.03 1e+0 32 1608251_at CB969689 similar to Glutamate decarboxylase - 5e+0 At4g25950 VATG3 (vacuolar ATP synthase G3) C.G. S.X.
0.03 1e+0 32 1608266_at CD007703 hypothetical protein LOC100262717 - 1e-40 At2g37600 60S ribosomal protein L36 (RPL36A) C.G. S.X.
0.04 5e+0 30 1619659_s_at CF405842 pectate lyase PL1-like - 2e-1 At4g26230 60S ribosomal protein L31 (RPL31B) C.G. S.X.
0.01 5e+0 30 1618576_at BQ800615 pectate lyase PL1-like - 4e-124 At4g13710 pectate lyase family protein C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.03 1e+0 34 Arabidopsis thaliana At3g56970 824864 BHLH038 F:transcription factor activity, DNA binding;P:regulation of transcription;C:nucleus;PMFO - - - C.G. S.X.
0.04 6e-3 42 Glycine max GmaAffx.74865.1.S1_at BM269818 - - 1e-44 At5g56790 protein kinase family protein C.G. S.X.
0.04 2e+0 32 Hordeum vulgare HV_CEa0008A14r2_s_at HV_CEa0008A14r2 - - 2e+0 At3g46060 ATRAB8A C.G. S.X.
0.03 2e+0 34 Oryza sativa Os04g0413000 9632.m03233 - ABC transporter related domain containing protein 5e-15 At5g03910 ATATH12 C.G. S.X.
0.04 9e-2 38 Populus trichocarpa PtpAffx.225869.1.S1_at pmrna45506 hypothetical protein - 6e-64 At3g13690 protein kinase family protein C.G. S.X.
0.06 3e-1 36 Triticum aestivum TaAffx.52798.1.A1_at BJ219227 - - 5e+0 At5g62180 AtCXE20 (Arabidopsis thaliana carboxyesterase 20) C.G. S.X.
0.03 2e+0 32 Zea mays Zm.9415.1.A1_at BM341676 - - 7e-2 At5g01075 beta-galactosidase C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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