Gene omics information

Query gene ID	1620137_s_at
Gene name	hypothetical protein LOC100260466
Organism	Vitis vinifera

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.91	98.8	1620137_s_at	CB911784	hypothetical protein LOC100260466	-	3e+0	At3g20510	unknown protein	S.X.	H.G.	Please select
0.77	92.3	1618627_at	CB978179	hypothetical protein LOC100253668 /// hypothetical LOC100267244	-	1e+0	At4g25890	60S acidic ribosomal protein P3 (RPP3A)	S.X.	H.G.	Please select
0.71	89.5	1617980_at	CB346475	-	-	8e-1	At5g66800	unknown protein	S.X.	H.G.	Please select
0.67	87.9	1617848_at	CB346603	hypothetical protein LOC100253668 /// hypothetical LOC100267244	-	2e-6	At2g28490	cupin family protein	S.X.	H.G.	Please select
0.44	64.1	1613161_at	BQ792976	hypothetical protein LOC100257921	-	3e+0	At4g18860	unknown protein	S.X.	H.G.	Please select
0.32	43.1	1614697_at	CB346214	hypothetical protein LOC100255962	-	5e+0	At5g07550	GRP19 (GLYCINE-RICH PROTEIN 19)	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
20.3	99.9	GSM287875	Green hard berry C17 from plant 2 cluster proximal position, biological rep 2	GSE11406	Expression data in individual grape berries during ripening initation
17.7	99.9	GSM287883	Green soft berry A23 from plant 1 cluster distal position, biological rep 1	GSE11406	Expression data in individual grape berries during ripening initation
16.1	99.9	GSM287867	Green hard berry C1 from plant 1 cluster proximal position, biological rep 2	GSE11406	Expression data in individual grape berries during ripening initation
12.1	99.8	GSM287882	Green soft berry A21 from plant 1 cluster proximal position, biological rep 2	GSE11406	Expression data in individual grape berries during ripening initation
10.9	99.7	GSM287877	Green hard berry B12 from plant 2 cluster distal position, biological rep 1	GSE11406	Expression data in individual grape berries during ripening initation
10.6	99.7	GSM287871	Green hard berry C4 from plant 1 cluster distal position, biological rep 2	GSE11406	Expression data in individual grape berries during ripening initation
10.1	99.6	GSM287869	Green hard berry C3 from plant 1 cluster distal position, biological rep 1	GSE11406	Expression data in individual grape berries during ripening initation
9.6	99.6	GSM287884	Green soft berry C7 from plant 1 cluster distal position, biological rep 2	GSE11406	Expression data in individual grape berries during ripening initation
9.5	99.6	GSM287891	Pink soft berry B23 from plant 1 cluster proximal position, biological rep 2	GSE11406	Expression data in individual grape berries during ripening initation
9.4	99.6	GSM287866	Green hard berry B21 from plant 1 cluster proximal position, biological rep 1	GSE11406	Expression data in individual grape berries during ripening initation

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.05	2e-1	34	1620902_a_at	CD801216	-	-	6e-1	At1g67210	proline-rich spliceosome-associated (PSP) family protein / zinc knuckle (CCHC-type) family protein	C.G.	S.X.	Please select
0.03	4e+0	30	1620563_at	CD714913	-	-	3e-1	At5g62350	invertase/pectin methylesterase inhibitor family protein / DC 1.2 homolog (FL5-2I22)	C.G.	S.X.	Please select
0.02	4e+0	30	1619871_at	CD003937	-	-	2e+0	At5g46940	invertase/pectin methylesterase inhibitor family protein	C.G.	S.X.	Please select
0.02	4e+0	30	1619064_at	CD800161	hypothetical protein LOC100257741	-	1e-69	At5g10780	-	C.G.	S.X.	Please select
0.05	4e+0	30	1619248_at	CA813733	hypothetical protein LOC100264750	-	3e-1	At5g18100	CSD3 (copper/zinc superoxide dismutase 3)	C.G.	S.X.	Please select
0.03	4e+0	30	1616797_at	CD714913	-	-	3e-1	At5g62350	invertase/pectin methylesterase inhibitor family protein / DC 1.2 homolog (FL5-2I22)	C.G.	S.X.	Please select
0.02	4e+0	30	1616101_at	CD003937	-	-	2e+0	At5g46940	invertase/pectin methylesterase inhibitor family protein	C.G.	S.X.	Please select
0.03	4e+0	30	1612950_at	CD711163	-	-	2e+0	At3g29670	transferase family protein	C.G.	S.X.	Please select
0.04	4e+0	30	1611300_at	CD008224	-	-	1e+0	At1g48010	invertase/pectin methylesterase inhibitor family protein	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.04	3e+0	32	Arabidopsis thaliana	At3g20510	821597	unknown protein	F:unknown;P:biological_process unknown;C:nucleus, cytoplasm;MPBFO	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.04	1e+0	34	Glycine max	GmaAffx.74105.1.S1_at	BQ298784	-	-	8e-1	At2g43280	far-red impaired responsive family protein / FAR1 family protein	C.G.	S.X.	Please select
0.15	6e-3	40	Hordeum vulgare	Contig7615_s_at	Contig7615	-	-	8e-1	At4g33520	PAA1 (P-TYPE ATP-ASE 1)	C.G.	S.X.	Please select
0.14	4e-4	46	Oryza sativa	Os07g0524900	AK071512.1	-	Protein of unknown function DUF6 domain containingprotein	3e+0	At4g16240	unknown protein	C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.04	4e+0	32	Populus trichocarpa	PtpAffx.50578.1.A1_at	CV240453	-	-	3e+0	At5g28288	-	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.14	8e-4	44	Triticum aestivum	Ta.28537.1.S1_x_at	BQ160686	-	-	3e-1	At5g37550	unknown protein	C.G.	S.X.	Please select
0.14	6e-12	69	Zea mays	Zm.7295.1.S1_at	CO526541	hypothetical protein LOC100276937 /// low-molecular-weight cysteine-rich protein LCR69	-	2e-2	At2g02100	LCR69 (LOW-MOLECULAR-WEIGHT CYSTEINE-RICH 69)	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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