Gene omics information

Query gene ID 1620092_at
Gene name hypothetical LOC100246138
Organism Vitis vinifera


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.5375.21620092_atCB340912hypothetical LOC100246138-2e-1At2g25000WRKY60S.X.H.G.
0.4666.51613286_atCF209004--5e+0At3g54560HTA11S.X.H.G.
0.3243.11620970_atCF404321--4e+0At2g13150transcription factorS.X.H.G.
0.3141.31617449_atCD010357--0Atmg00570-S.X.H.G.
0.2632.01607292_s_atBQ792973--0Atmg00580-S.X.H.G.
0.1010.31619830_atCB969902hypothetical protein LOC100249008 /// hypothetical protein LOC100257602-2e-1At1g02065SPL8 (SQUAMOSA PROMOTER BINDING PROTEIN-LIKE 8)S.X.H.G.
0.077.81617456_atCD717807--9e-8Atmg01060-S.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
21.099.9GSM322361genotype: Chardonnay - disease type: Bois Noir infected - rep1GSE12842Gene expression in grapevine in response to Bois noir infection
14.899.9GSM322362genotype: Chardonnay - disease type: Bois Noir infected - rep2GSE12842Gene expression in grapevine in response to Bois noir infection
6.498.9GSM322368genotype: Incrocio Manzoni - disease type: Bois Noir infected - rep2GSE12842Gene expression in grapevine in response to Bois noir infection
5.798.5GSM322363genotype: Chardonnay - disease type: Bois Noir infected - rep3GSE12842Gene expression in grapevine in response to Bois noir infection
5.398.2GSM436423V. riparia (VR, PI588259) SD, 13h 21 days - rep3GSE17502Photoperiod regulation of grape bud dormancy
5.198.1GSM322369genotype: Incrocio Manzoni - disease type: Healthy - rep1GSE12842Gene expression in grapevine in response to Bois noir infection
4.397.2GSM322364genotype: Chardonnay - disease type: Healthy - rep1GSE12842Gene expression in grapevine in response to Bois noir infection
4.397.2GSM436387Seyval (SV, Seyve Villard 5-276) SD, 13h 42 days - rep3GSE17502Photoperiod regulation of grape bud dormancy
4.297.1GSM322365genotype: Chardonnay - disease type: Healthy - rep2GSE12842Gene expression in grapevine in response to Bois noir infection
4.196.9GSM436380Seyval (SV, Seyve Villard 5-276) SD, 13h 21 days - rep2GSE17502Photoperiod regulation of grape bud dormancy
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.043e-1341618360_atCF204032.1--5e-13At2g32080PUR ALPHA-1C.G.S.X.
0.053e-1341615027_s_atCB977478hypothetical protein LOC100246785-1e-15At2g32080PUR ALPHA-1C.G.S.X.
0.021e+0321622562_atCD006619--7e-40At1g79510unknown proteinC.G.S.X.
0.031e+0321621668_atBQ792797similar to Histone H2B-2e-27At3g46030HTB11C.G.S.X.
0.021e+0321619855_atCB920107--1e-1At2g44745WRKY family transcription factorC.G.S.X.
0.021e+0321617236_atCD006619hypothetical protein LOC100243255-7e-40At1g79510unknown proteinC.G.S.X.
0.031e+0321615370_atCF372878hypothetical protein LOC100266022-6e-2At4g08330unknown proteinC.G.S.X.
0.031e+0321609884_atCB971876hypothetical protein LOC100253061-2e+1Atmg01370-C.G.S.X.
0.031e+0321607903_atCF608166hypothetical protein LOC100267377-1e+0At1g67670unknown proteinC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.032e-136Arabidopsis thalianaAt2g25000817039WRKY60Pathogen-induced transcription factor. Forms protein complexes with itself and with WRKY40. Coexpression with WRKY18 or WRKY40 made plants more susceptible to both P. syringae and B. cinerea. WRKY18, WRKY40, and WRKY60 have partially redundant roles in response to the hemibiotrophic bacterial pathogen Pseudomonas syringae and the necrotrophic fungal pathogen Botrytis cinerea, with WRKY18 playing a more important role than the other two.---C.G.S.X.
0.043e-136Glycine maxGmaAffx.36843.1.A1_atBI969529--7e-1At2g31050plastocyanin-like domain-containing proteinC.G.S.X.
0.042e+032Hordeum vulgareHV_CEb0009O15r2_s_atHV_CEb0009O15r2--2e-1At2g1975040S ribosomal protein S30 (RPS30A)C.G.S.X.
0.722e-95349Oryza sativaOsAffx.32299.1.A1_at---0C.G.S.X.
0.315e-65248Populus trichocarpaPtpAffx.220764.1.S1_s_atpmrna37187hypothetical protein-9e-1At5g35920CYP79A4PC.G.S.X.
0.385e-101367Triticum aestivumTa.6638.1.A1_atBJ228724--8e-77Atmg00960-C.G.S.X.
0.552e-98357Zea maysZmAffx.1416.1.S1_at40794996-91--3e-1At3g21860ASK10 (ARABIDOPSIS SKP1-LIKE 10)C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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