Gene omics information

Query gene ID 1620084_at
Gene name
Organism Vitis vinifera


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.9198.81620084_atCD721232--3e-26At1g76850SEC5A (EXOCYST COMPLEX COMPONENT SEC5)S.X.H.G.
0.1111.31608276_atCF405421--2e+0At2g03710SEP4 (SEPALLATA 4)S.X.H.G.
0.034.21612594_atCB978453hypothetical protein LOC100244655-1e+0At2g03320unknown proteinS.X.H.G.
0.034.21611380_atCF512134--1e+0At1g43670fructose-1,6-bisphosphatase, putative / D-fructose-1,6-bisphosphate 1-phosphohydrolase, putative / FBPase, putativeS.X.H.G.
0.034.21612420_atCD717999hypothetical protein LOC100252211-2e+0At1g19086unknown proteinS.X.H.G.
0.023.21621419_atBQ796694similar to Os09g0515500-4e+0At3g53370DNA-binding S1FA family proteinS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
7.299.1GSM147708Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 0 h post inoculation37
5.898.6GSM147721Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 4 h post inoculation50
5.598.4GSM147726Vitis aestivalis 'Norton ' mock inoculated at 0 h post inoculation55
4.797.7GSM147728Vitis aestivalis 'Norton ' mock inoculated at 8 h post inoculation57
4.196.9GSM147723Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation52
4.096.7GSM147722Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation51
4.096.7GSM147711Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation40
3.796.2GSM147727Vitis aestivalis 'Norton ' mock inoculated at 4 h post inoculation56
3.495.5GSM147709Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 4 h post inoculation38
3.395.2GSM147742Vitis aestivalis 'Norton ' mock inoculated at 24 h post inoculation71
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
1.00013201616283_atCD721232hypothetical protein LOC100241808-3e-26At1g76850SEC5A (EXOCYST COMPLEX COMPONENT SEC5)C.G.S.X.
0.022e+0321622630_s_atCF209498hypothetical protein LOC100253858-1e-29At2g41250haloacid dehalogenase-like hydrolase family proteinC.G.S.X.
0.022e+0321622317_atCB340583--4e-1At4g0081060S acidic ribosomal protein P1 (RPP1B)C.G.S.X.
0.022e+0321619375_atCD711519hypothetical protein LOC100247352-3e-30At1g69410ELF5A-3 (EUKARYOTIC ELONGATION FACTOR 5A-3)C.G.S.X.
0.032e+0321617999_atCA815163hypothetical protein LOC100248666-4e+0At3g15280unknown proteinC.G.S.X.
0.022e+0321614279_atCD712335--3e-32At5g26240CLC-D (CHLORIDE CHANNEL D)C.G.S.X.
0.032e+0321614136_atCB347754hypothetical protein LOC100246668-7e-55At5g47670NF-YB6 (NUCLEAR FACTOR Y, SUBUNIT B6)C.G.S.X.
0.022e+0321612038_atCB835642--1e-7At3g11980MS2 (MALE STERILITY 2)C.G.S.X.
0.022e+0321610502_atBQ795599hypothetical protein LOC100261408-3e-32At5g26240CLC-D (CHLORIDE CHANNEL D)C.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.173e-26119Arabidopsis thalianaAt1g76850844020SEC5A (EXOCYST COMPLEX COMPONENT SEC5)F:molecular_function unknown;P:pollen germination, pollen tube growth;C:cytosol, plasma membrane;MFPOVB---C.G.S.X.
0.038e+032Glycine maxPsAffx.psZG010xF20f_atPsAffx.psZG010xF20f--2e+0At4g26470calcium ion bindingC.G.S.X.
0.033e+032Hordeum vulgareContig14088_x_atContig14088--3e-2At1g76050pseudouridine synthase family proteinC.G.S.X.
0.133e-31137Oryza sativaOs04g0421900AK066958.1-Conserved hypothetical protein6e-22At1g76850SEC5A (EXOCYST COMPLEX COMPONENT SEC5)C.G.S.X.
0.031e-138Populus trichocarpaPtpAffx.119002.1.S1_atBU872606--3e-1At2g41590unknown proteinC.G.S.X.
0.046e+032Triticum aestivumTaAffx.118523.1.A1_atBJ321544--4e+0At3g61111structural constituent of ribosomeC.G.S.X.
0.032e+032Zea maysZm.6234.2.A1_atAI881460--8e-7At2g30110ATUBA1C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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