Gene omics information

Query gene ID	1620064_at
Gene name	hypothetical protein LOC100251825
Organism	Vitis vinifera

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.71	89.5	1620064_at	CF211420	hypothetical protein LOC100251825	-	3e-58	At3g55260	HEXO1 (BETA-HEXOSAMINIDASE 1)	S.X.	H.G.	Please select
0.71	89.5	1610024_at	CA809549	hypothetical protein LOC100250743	-	2e-33	At5g20090	unknown protein	S.X.	H.G.	Please select
0.57	79.8	1619344_s_at	CB968636	hypothetical protein LOC100248250	-	2e+0	At3g51730	saposin B domain-containing protein	S.X.	H.G.	Please select
0.50	72.7	1617753_at	BQ799134	hypothetical protein LOC100249945	-	3e-1	At4g12380	unknown protein	S.X.	H.G.	Please select
0.43	61.5	1611030_at	BQ792570	hypothetical protein LOC100257929	-	2e-22	At5g47420	-	S.X.	H.G.	Please select
0.37	51.7	1607294_at	CB347461	hypothetical protein LOC100246786	-	4e-112	At5g58290	RPT3 (REGULATORY PARTICLE TRIPLE-A ATPASE 3)	S.X.	H.G.	Please select
0.32	43.1	1618227_at	CB981519	hypothetical protein LOC100256050	-	4e-20	At1g73570	suppressor of lin-12-like protein-related / sel-1 protein-related	S.X.	H.G.	Please select
0.26	32.0	1608934_at	CF405409	hypothetical protein LOC100265538	-	3e-24	At2g28390	SAND family protein	S.X.	H.G.	Please select
0.24	28.7	1618690_at	CF207597	hypothetical protein LOC100259195	-	3e-16	At1g20110	zinc finger (FYVE type) family protein	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
2.5	91.9	GSM147735	Vitis aestivalis 'Norton ' mock inoculated at 12 h post inoculation	64
2.3	90.7	GSM147719	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 48 h post inoculation	48
2.2	89.9	GSM147717	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation	46
2.1	89.1	GSM147718	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 24 h post inoculation	47
2.0	88.2	GSM147716	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation	45
1.9	87.2	GSM147734	Vitis aestivalis 'Norton ' mock inoculated at 8 h post inoculation	63
1.9	87.2	GSM436370	Seyval (SV, Seyve Villard 5-276) SD, 13h 3 days - rep1	GSE17502	Photoperiod regulation of grape bud dormancy
1.9	87.2	GSM147715	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 4 h post inoculation	44
1.7	84.7	GSM299461	C_ni_rep1	GSE11857	Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genes
1.7	84.7	GSM147743	Vitis aestivalis 'Norton ' mock inoculated at 48 h post inoculation	72

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.08	9e-22	103	1607018_at	CF208316	-	-	1e+0	At5g58250	unknown protein	C.G.	S.X.	Please select
0.04	2e-4	46	1617875_at	CB971740	hypothetical protein LOC100262386	-	4e-19	At1g65590	HEXO3 (BETA-HEXOSAMINIDASE 3)	C.G.	S.X.	Please select
0.02	2e-1	36	1617378_at	CB978610	hypothetical protein LOC100265457	-	7e-43	At5g13780	GCN5-related N-acetyltransferase, putative	C.G.	S.X.	Please select
0.01	7e-1	34	1610972_at	CF208538	-	-	2e+0	At1g69825	-	C.G.	S.X.	Please select
0.02	3e+0	32	1619005_at	CF206493.1	-	-	3e-14	At5g46410	NLI interacting factor (NIF) family protein	C.G.	S.X.	Please select
0.02	3e+0	32	1618959_at	CB977982	hypothetical protein LOC100247141	-	9e-1	At5g20020	RAN2	C.G.	S.X.	Please select
0.01	3e+0	32	1617625_at	CB006850	hypothetical LOC100246722	-	2e-6	At3g05680	EMB2016 (embryo defective 2016)	C.G.	S.X.	Please select
0.01	3e+0	32	1617396_at	BQ794655	hypothetical protein LOC100257329	-	8e-4	At4g34588	CPuORF2 (Conserved peptide upstream open reading frame 2)	C.G.	S.X.	Please select
0.01	3e+0	32	1613810_at	CB006850	-	-	2e-6	At3g05680	EMB2016 (embryo defective 2016)	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.30	3e-58	226	Arabidopsis thaliana	At3g55260	824692	HEXO1 (BETA-HEXOSAMINIDASE 1)	Encodes a protein with β-hexosaminidase activity (the enzyme is active with p-nitrophenyl-β-N-acetylglucosaminide as substrate but displayed only a minor activity toward p-nitrophenyl-β-N-acetylgalactosaminide). The enzyme displays no distinct preference for a specific terminal GlcNAc residue and indeed cleaved the asialoagalactodabsylglycopeptide GnGn to a mixture of products.	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.23	2e-48	194	Glycine max	GmaAffx.24396.1.A1_at	BU547464	-	-	1e-16	At3g55260	HEXO1 (BETA-HEXOSAMINIDASE 1)	C.G.	S.X.	Please select
0.05	1e-6	54	Hordeum vulgare	Contig10648_at	Contig10648	-	-	6e-20	At1g65590	HEXO3 (BETA-HEXOSAMINIDASE 3)	C.G.	S.X.	Please select
0.07	6e-15	83	Oryza sativa	Os05g0115900	BX898274	-	Beta-N-acetylhexosaminidase-like protein	2e+0	At1g08470	strictosidine synthase family protein	C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.33	5e-138	492	Populus trichocarpa	PtpAffx.13128.1.S1_at	CV256441	hypothetical protein	-	6e-67	At3g55260	HEXO1 (BETA-HEXOSAMINIDASE 1)	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.09	1e-2	42	Triticum aestivum	Ta.16341.1.S1_s_at	BQ237896	-	-	4e-2	At3g55260	HEXO1 (BETA-HEXOSAMINIDASE 1)	C.G.	S.X.	Please select
0.09	2e-8	59	Zea mays	Zm.1436.1.S1_at	CB617096	beta-hexosaminidase beta chain	-	5e-2	At3g55260	HEXO1 (BETA-HEXOSAMINIDASE 1)	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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