CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID 1620010_at

Gene name

Organism Vitis vinifera

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.72 89.7 1620010_at CA813625 - - 3e+0 At5g40700 unknown protein S.X. H.G.
0.62 83.3 1612469_at CF205528.1 hypothetical protein LOC100248700 - 3e-5 At4g34190 SEP1 (STRESS ENHANCED PROTEIN 1) S.X. H.G.
0.61 83.2 1612692_at CF207590 hypothetical LOC100254134 - 4e+0 At4g24980 - S.X. H.G.
0.58 79.8 1613030_at CF512983 - - 1e+0 At2g45450 ZPR1 (LITTLE ZIPPER 1) S.X. H.G.
0.56 79.4 1609173_at CF373658 - - 2e+0 At1g27350 - S.X. H.G.
0.53 75.2 1620107_at CF518921 - - 4e+0 At1g74930 ORA47 S.X. H.G.
0.50 72.7 1613337_x_at CF204544.1 - - 3e-1 At4g28703 - S.X. H.G.
0.48 68.8 1607102_at CF606606 - - 2e+0 At3g24506 unknown protein S.X. H.G.
0.43 61.5 1606633_at CD801002 - - 2e+0 At2g42190 unknown protein S.X. H.G.
0.39 54.9 1611555_at CB971903 hypothetical protein LOC100267822 - 6e-1 At1g66400 calmodulin-related protein, putative S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
14.6 99.9 GSM147718 Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 24 h post inoculation 47
12.5 99.8 GSM147742 Vitis aestivalis 'Norton ' mock inoculated at 24 h post inoculation 71
11.8 99.8 GSM147727 Vitis aestivalis 'Norton ' mock inoculated at 4 h post inoculation 56
11.5 99.7 GSM147709 Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 4 h post inoculation 38
11.3 99.7 GSM147724 Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 24 h post inoculation 53
9.9 99.6 GSM147743 Vitis aestivalis 'Norton ' mock inoculated at 48 h post inoculation 72
9.0 99.5 GSM147719 Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 48 h post inoculation 48
8.1 99.4 GSM147712 Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 24 h post inoculation 41
7.3 99.2 GSM147739 Vitis aestivalis 'Norton ' mock inoculated at 4 h post inoculation 68
7.2 99.1 GSM147730 Vitis aestivalis 'Norton ' mock inoculated at 24 h post inoculation 59
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.25 5e-67 252 1607601_at CF209956 hypothetical protein LOC100244746 - 2e-15 At1g09400 12-oxophytodienoate reductase, putative C.G. S.X.
0.35 5e-30 129 1622396_at CF202537.1 hypothetical protein LOC100256781 /// hypothetical protein LOC100255087 - 4e-1 At1g76680 OPR1 C.G. S.X.
0.35 5e-30 129 1621543_x_at CF202537.1 hypothetical protein LOC100256781 - 4e-1 At1g76680 OPR1 C.G. S.X.
0.03 2e-1 34 1613269_at CB914077 - - 4e-4 At4g30410 transcription factor C.G. S.X.
0.03 2e-1 34 1609496_at CB914077 hypothetical protein LOC100258663 - 4e-4 At4g30410 transcription factor C.G. S.X.
0.02 8e-1 32 1616196_at CB970069 hypothetical protein LOC100257603 - 2e-59 At4g32150 ATVAMP711 (ARABIDOPSIS THALIANA VESICLE-ASSOCIATED MEMBRANE PROTEIN 711) C.G. S.X.
0.02 8e-1 32 1615460_at CF405945 hypothetical protein LOC100249750 - 2e-91 At1g06700 serine/threonine protein kinase, putative C.G. S.X.
0.02 3e+0 30 1620315_at CF604880 - - 3e-6 At2g36480 zinc finger (C2H2-type) family protein C.G. S.X.
0.04 3e+0 30 1616430_at CA810723 - - 2e-7 At5g38410 ribulose bisphosphate carboxylase small chain 3B / RuBisCO small subunit 3B (RBCS-3B) (ATS3B) C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.03 3e+0 32 Arabidopsis thaliana At5g40700 834070 unknown protein F:molecular_function unknown;P:biological_process unknown;C:unknown;OMPBFV - - - C.G. S.X.
0.05 1e+0 34 Glycine max Gma.4728.1.A1_at BI968944 - - 7e-1 At1g51330 serpin-related / serine protease inhibitor-related C.G. S.X.
0.04 5e+0 30 Hordeum vulgare HVSMEn0016M22r2_at HVSMEn0016M22r2 - - 2e-1 At3g49390 CID10 C.G. S.X.
0.03 1e+0 34 Oryza sativa Os07g0611600 AK102547.1 - Conserved hypothetical protein 1e-1 At5g01881 unknown protein C.G. S.X.
0.06 7e-8 57 Populus trichocarpa PtpAffx.2548.1.A1_at CV259452 - - 4e-12 At1g76690 OPR2 C.G. S.X.
0.05 3e-3 42 Triticum aestivum TaAffx.29434.1.S1_at CA642975 - - 2e+1 At5g38950 germin-like protein-related C.G. S.X.
0.04 5e+0 30 Zea mays ZmAffx.842.1.A1_at AI770597 - - 3e+0 At3g15900 unknown protein C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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