CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID 1619950_at

Gene name

Organism Vitis vinifera

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.91 98.8 1619950_at CB003880 - - 6e-12 At1g14890 enzyme inhibitor/ pectinesterase/ pectinesterase inhibitor S.X. H.G.
0.40 57.7 1608098_at BQ799852 hypothetical protein LOC100257092 - 2e-5 At1g60160 potassium transporter family protein S.X. H.G.
0.05 6.0 1609141_at CF511265 hypothetical protein LOC100257570 - 4e-26 At1g58110 bZIP family transcription factor S.X. H.G.
0.04 5.2 1620765_at CF215290 hypothetical protein LOC100266143 - 2e-124 At1g20090 ROP2 (RHO-RELATED PROTEIN FROM PLANTS 2) S.X. H.G.
0.04 5.2 1613730_at CB036143 hypothetical protein LOC100264670 - 2e-43 At2g26460 RED family protein S.X. H.G.
0.01 2.1 1607928_at CF201793.1 - - 5e-3 At4g08230 glycine-rich protein S.X. H.G.
Click here to hide the above table.

Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
5.1 98.1 GSM436362 Seyval (SV, Seyve Villard 5-276) LD, 15h 28 days - rep2 GSE17502 Photoperiod regulation of grape bud dormancy
3.9 96.6 GSM436394 V. riparia (VR, PI588259) LD, 15h 7 days - rep1 GSE17502 Photoperiod regulation of grape bud dormancy
3.7 96.2 GSM147721 Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 4 h post inoculation 50
3.3 95.2 GSM147708 Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 0 h post inoculation 37
3.1 94.6 GSM436380 Seyval (SV, Seyve Villard 5-276) SD, 13h 21 days - rep2 GSE17502 Photoperiod regulation of grape bud dormancy
3.0 94.2 GSM436404 V. riparia (VR, PI588259) LD, 15h 28 days - rep2 GSE17502 Photoperiod regulation of grape bud dormancy
3.0 94.2 GSM147702 Vitis vinifera 'Cabernet sauvignon' mock inoculated at 0 h post inoculation 31
3.0 94.2 GSM436347 Seyval (SV, Seyve Villard 5-276) LD, 15h 1 days - rep2 GSE17502 Photoperiod regulation of grape bud dormancy
2.9 93.8 GSM436410 V. riparia (VR, PI588259) SD, 13h 1 days - rep2 GSE17502 Photoperiod regulation of grape bud dormancy
2.9 93.8 GSM147724 Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 24 h post inoculation 53
Click here to hide the above table.

Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.96 0 1241 1616154_at CB003880 hypothetical LOC100252606 - 6e-12 At1g14890 enzyme inhibitor/ pectinesterase/ pectinesterase inhibitor C.G. S.X.
0.30 2e-55 214 1617201_at CF210297 hypothetical protein LOC100247498 - 3e+0 At4g14090 UDP-glucoronosyl/UDP-glucosyl transferase family protein C.G. S.X.
0.03 3e-2 38 1615882_at CF204860.1 - - 6e-6 At4g24175 unknown protein C.G. S.X.
0.02 1e-1 36 1616601_at CF210956 hypothetical protein LOC100256416 - 9e-9 At3g26420 ATRZ-1A C.G. S.X.
0.03 2e+0 32 1622048_at CF519161 hypothetical protein LOC100245979 - 1e-9 At2g47820 unknown protein C.G. S.X.
0.02 2e+0 32 1620988_at CD799819 hypothetical protein LOC100251707 - 4e-50 At4g35410 clathrin adaptor complex small chain family protein C.G. S.X.
0.02 2e+0 32 1618417_a_at CB343445 hypothetical protein LOC100257590 - 7e-83 At4g35410 clathrin adaptor complex small chain family protein C.G. S.X.
0.04 2e+0 32 1618096_s_at BQ794769 ripening-related protein-like - 6e+0 At2g16340 unknown protein C.G. S.X.
0.02 2e+0 32 1617016_at CF210834 hypothetical protein LOC100261969 - 3e-1 At1g04960 - C.G. S.X.
Click here to hide the above table.

Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.15 6e-12 71 Arabidopsis thaliana At1g14890 838054 enzyme inhibitor/ pectinesterase/ pectinesterase inhibitor F:enzyme inhibitor activity, pectinesterase inhibitor activity, pectinesterase activity;P:biological_process unknown;C:unknown;P - - - C.G. S.X.
0.12 1e-4 48 Glycine max GmaAffx.6824.1.S1_at AI416876 - - 3e-5 At1g14890 enzyme inhibitor/ pectinesterase/ pectinesterase inhibitor C.G. S.X.
0.03 7e-1 34 Hordeum vulgare HZ01L15u_at HZ01L15u - - 4e-3 At5g39170 unknown protein C.G. S.X.
0.07 7e-4 46 Oryza sativa OsAffx.20662.1.A1_at - - - 0 C.G. S.X.
0.12 2e-3 44 Populus trichocarpa PtpAffx.58139.1.S1_at CV269192 hypothetical protein - 6e-22 At2g01610 invertase/pectin methylesterase inhibitor family protein C.G. S.X.
0.03 4e-1 36 Triticum aestivum TaAffx.31187.1.S1_at CA618664 - - 4e+0 At1g14890 enzyme inhibitor/ pectinesterase/ pectinesterase inhibitor C.G. S.X.
0.05 6e-1 34 Zea mays Zm.2200.1.A1_at BG841101 - - 6e+0 At4g35785 nucleic acid binding / nucleotide binding C.G. S.X.
Click here to hide the above table.

Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
Click here to hide the above table.

Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
Click here to hide the above table.

Back to the CoP portal site

Back to the KAGIANA project homepage