Gene omics information

Query gene ID	1619947_at
Gene name	hypothetical protein LOC100266603
Organism	Vitis vinifera

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.60	81.9	1619947_at	BQ794365	hypothetical protein LOC100266603	-	5e-6	At3g05280	integral membrane Yip1 family protein	S.X.	H.G.	Please select
0.71	89.5	1609752_at	CF213671	hypothetical protein LOC100257494	-	2e-43	At5g13430	ubiquinol-cytochrome C reductase iron-sulfur subunit, mitochondrial, putative / Rieske iron-sulfur protein, putative	S.X.	H.G.	Please select
0.63	84.3	1607687_s_at	BQ792489	hypothetical protein LOC100241478	-	3e-42	At5g26667	PYR6	S.X.	H.G.	Please select
0.50	72.7	1620467_s_at	CA817782	hypothetical protein LOC100250756	-	2e-9	At1g49140	NADH-ubiquinone oxidoreductase-related	S.X.	H.G.	Please select
0.44	64.1	1612623_at	CA817679	hypothetical protein LOC100247134	-	1e-4	At5g47890	NADH-ubiquinone oxidoreductase B8 subunit, putative	S.X.	H.G.	Please select
0.38	53.6	1611461_at	BQ792825	hypothetical protein LOC100246984	-	1e-37	At4g34700	complex 1 family protein / LVR family protein	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
3.5	95.7	GSM147717	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation	46
2.8	93.4	GSM147735	Vitis aestivalis 'Norton ' mock inoculated at 12 h post inoculation	64
2.7	93.0	GSM147739	Vitis aestivalis 'Norton ' mock inoculated at 4 h post inoculation	68
2.6	92.5	GSM147734	Vitis aestivalis 'Norton ' mock inoculated at 8 h post inoculation	63
2.6	92.5	GSM147721	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 4 h post inoculation	50
2.5	91.9	GSM147733	Vitis aestivalis 'Norton ' mock inoculateds at 4 h post inoculation	62
2.5	91.9	GSM147716	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation	45
2.4	91.3	GSM147715	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 4 h post inoculation	44
2.4	91.3	GSM147741	Vitis aestivalis 'Norton ' mock inoculated at 12 h post inoculation	70
2.4	91.3	GSM147743	Vitis aestivalis 'Norton ' mock inoculated at 48 h post inoculation	72

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.03	3e-1	34	1621821_s_at	CD802160	hypothetical protein LOC100267911	-	3e-1	At4g29480	mitochondrial ATP synthase g subunit family protein	C.G.	S.X.	Please select
0.03	3e-1	34	1619083_at	CD802160	hypothetical protein LOC100267911	-	3e-1	At4g29480	mitochondrial ATP synthase g subunit family protein	C.G.	S.X.	Please select
0.03	3e-1	34	1609199_at	CF202380.1	-	-	2e-2	At4g26210	mitochondrial ATP synthase g subunit family protein	C.G.	S.X.	Please select
0.03	3e-1	34	1608559_at	CD800581	hypothetical protein LOC100245144	-	2e-8	At4g30990	binding	C.G.	S.X.	Please select
0.02	1e+0	32	1621723_at	CA817798	hypothetical protein LOC100248744	-	6e-14	At1g61110	anac025 (Arabidopsis NAC domain containing protein 25)	C.G.	S.X.	Please select
0.02	1e+0	32	1617989_at	CF511562	hypothetical protein LOC100258149	-	4e-1	At5g19340	unknown protein	C.G.	S.X.	Please select
0.03	1e+0	32	1616527_at	CD721725	-	-	2e-8	At4g29750	RNA binding	C.G.	S.X.	Please select
0.02	1e+0	32	1614471_at	BQ792249	hypothetical protein LOC100245854	-	6e+0	At5g26594	ARR24 (Arabidopsis response regulator 24)	C.G.	S.X.	Please select
0.03	1e+0	32	1612721_at	CD721725	hypothetical protein LOC100247581	-	2e-8	At4g29750	RNA binding	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.14	5e-6	52	Arabidopsis thaliana	At3g05280	819692	integral membrane Yip1 family protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MOFP	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.22	5e-19	95	Glycine max	Gma.739.2.A1_at	BM121549	-	-	2e-8	At3g05280	integral membrane Yip1 family protein	C.G.	S.X.	Please select
0.07	6e-4	44	Hordeum vulgare	Contig9005_at	Contig9005	-	-	1e-14	At3g05280	integral membrane Yip1 family protein	C.G.	S.X.	Please select
0.03	2e+0	34	Oryza sativa	Os04g0512500	AK107826.1	-	Conserved hypothetical protein	4e-1	At4g15715	-	C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.29	5e-22	105	Populus trichocarpa	Ptp.460.1.A1_at	CK087646	hypothetical protein	-	1e-34	At5g27490	integral membrane Yip1 family protein	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.10	1e-3	44	Triticum aestivum	Ta.7590.2.S1_a_at	CK215141	-	-	9e-8	At5g27490	integral membrane Yip1 family protein	C.G.	S.X.	Please select
0.10	3e-5	48	Zea mays	Zm.3919.1.S1_at	BG840867	hypothetical protein LOC100194180	-	7e-16	At3g05280	integral membrane Yip1 family protein	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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