Gene omics information

Query gene ID	1619910_at
Gene name
Organism	Vitis vinifera

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.91	98.8	1619910_at	CF405078	-	-	2e-1	At3g27410	unknown protein	S.X.	H.G.	Please select
0.60	81.9	1610936_at	CB972355	hypothetical protein LOC100259946	-	2e-1	At3g14870	unknown protein	S.X.	H.G.	Please select
0.44	64.1	1610370_s_at	CB975555	hypothetical protein LOC100243953	-	1e+0	At5g22430	unknown protein	S.X.	H.G.	Please select
0.33	45.7	1609022_at	CF371738	hypothetical protein LOC100250008	-	1e+0	At4g13690	unknown protein	S.X.	H.G.	Please select
0.31	41.3	1617350_at	CB975555	hypothetical protein LOC100243953	-	1e+0	At5g22430	unknown protein	S.X.	H.G.	Please select
0.03	4.2	1620155_at	CB969445	hypothetical protein LOC100242363	-	1e+0	At3g56970	BHLH038	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
50.8	100.0	GSM287869	Green hard berry C3 from plant 1 cluster distal position, biological rep 1	GSE11406	Expression data in individual grape berries during ripening initation
5.9	98.6	GSM436401	V. riparia (VR, PI588259) LD, 15h 21 days - rep2	GSE17502	Photoperiod regulation of grape bud dormancy
4.0	96.7	GSM436403	V. riparia (VR, PI588259) LD, 15h 28 days - rep1	GSE17502	Photoperiod regulation of grape bud dormancy
3.7	96.2	GSM436360	Seyval (SV, Seyve Villard 5-276) LD, 15h 21 days - rep3	GSE17502	Photoperiod regulation of grape bud dormancy
3.7	96.2	GSM436422	V. riparia (VR, PI588259) SD, 13h 21 days - rep2	GSE17502	Photoperiod regulation of grape bud dormancy
3.5	95.7	GSM436354	Seyval (SV, Seyve Villard 5-276) LD, 15h 7 days - rep3	GSE17502	Photoperiod regulation of grape bud dormancy
3.4	95.5	GSM436358	Seyval (SV, Seyve Villard 5-276) LD, 15h 21 days - rep1	GSE17502	Photoperiod regulation of grape bud dormancy
3.2	94.9	GSM436396	V. riparia (VR, PI588259) LD, 15h 7 days - rep3	GSE17502	Photoperiod regulation of grape bud dormancy
3.2	94.9	GSM436421	V. riparia (VR, PI588259) SD, 13h 21 days - rep1	GSE17502	Photoperiod regulation of grape bud dormancy
3.1	94.6	GSM436418	V. riparia (VR, PI588259) SD, 13h 14 days - rep1	GSE17502	Photoperiod regulation of grape bud dormancy

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.04	6e-2	36	1620077_at	CB002067	-	-	2e+0	At1g53345	unknown protein	C.G.	S.X.	Please select
0.04	6e-2	36	1607443_at	CB002067	-	-	2e+0	At1g53345	unknown protein	C.G.	S.X.	Please select
0.03	1e+0	32	1613598_at	CB344526	hypothetical protein LOC100256270	-	2e-2	At4g03200	catalytic	C.G.	S.X.	Please select
0.02	1e+0	32	1607924_at	CB971581	hypothetical protein LOC100261557	-	3e-11	At4g16580	catalytic	C.G.	S.X.	Please select
0.02	4e+0	30	1622869_s_at	CF514855	hypothetical protein LOC100263432	-	3e-117	At3g14290	PAE2	C.G.	S.X.	Please select
0.03	4e+0	30	1617340_x_at	CF200929.1	-	-	5e+0	At5g07250	ATRBL3 (ARABIDOPSIS RHOMBOID-LIKE PROTEIN 3)	C.G.	S.X.	Please select
0.02	4e+0	30	1612840_a_at	BQ794471	hypothetical protein LOC100261580	-	2e+0	At3g11470	4'-phosphopantetheinyl transferase family protein	C.G.	S.X.	Please select
0.02	4e+0	30	1608615_at	BQ799732	hypothetical protein LOC100255091	-	2e-33	At3g61440	CYSC1 (CYSTEINE SYNTHASE C1)	C.G.	S.X.	Please select
0.02	4e+0	30	1608204_at	CF209964	hypothetical protein LOC100266265	-	4e-94	At4g28950	ROP9 (RHO-RELATED PROTEIN FROM PLANTS 9)	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.04	2e-1	36	Arabidopsis thaliana	At3g27410	822362	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:anchored to membrane;P	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.04	1e+0	34	Glycine max	GmaAffx.93592.1.S1_x_at	CF809317	-	-	3e-12	At5g19855	unknown protein	C.G.	S.X.	Please select
0.04	2e+0	32	Hordeum vulgare	HU09E15u_at	HU09E15u	-	-	1e+1	At4g37090	unknown protein	C.G.	S.X.	Please select
0.04	2e+0	34	Oryza sativa	OsAffx.26457.1.S1_at	-	-	-	0			C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.04	5e+0	32	Populus trichocarpa	PtpAffx.8075.3.A1_at	CV254582	-	-	1e-1	At2g41070	EEL (ENHANCED EM LEVEL)	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.04	4e-3	42	Triticum aestivum	TaAffx.56421.1.S1_at	CA652055	-	-	4e-3	At5g37760	DNAJ heat shock N-terminal domain-containing protein	C.G.	S.X.	Please select
0.04	1e+0	32	Zea mays	Zm.1402.1.S1_at	BF729248	-	-	4e+0	At1g29040	unknown protein	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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