CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID 1619828_at

Gene name hypothetical protein LOC100260718

Organism Vitis vinifera

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.88 95.4 1619828_at CF371771 hypothetical protein LOC100260718 - 2e-1 At4g21213 unknown protein S.X. H.G.
0.57 79.8 1617507_s_at CF206215.1 - - 4e+0 Atmg00550 - S.X. H.G.
0.52 73.9 1606526_at BQ799338 hypothetical protein LOC100244223 - 4e-3 At3g07565 DNA binding S.X. H.G.
0.49 69.3 1618960_at CF404640 hypothetical protein LOC100251117 - 3e+0 At3g58310 receptor-like protein kinase-related S.X. H.G.
0.48 68.8 1620152_at CD004112 hypothetical protein LOC100252793 - 4e-1 At2g28500 LBD11 (LOB DOMAIN-CONTAINING PROTEIN 11) S.X. H.G.
0.47 67.7 1617605_at CF513977 - - 0 Atcg00680 - S.X. H.G.
0.47 67.7 1612469_at CF205528.1 hypothetical protein LOC100248700 - 3e-5 At4g34190 SEP1 (STRESS ENHANCED PROTEIN 1) S.X. H.G.
0.46 66.5 1609422_a_at CA816734 - - 2e-12 Atcg00050 - S.X. H.G.
0.46 66.5 1612624_at CB974055 similar to Os06g0598500 - 0 Atcg00540 - S.X. H.G.
0.46 66.5 1609173_at CF373658 - - 2e+0 At1g27350 - S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
14.2 99.9 GSM147708 Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 0 h post inoculation 37
12.9 99.8 GSM147727 Vitis aestivalis 'Norton ' mock inoculated at 4 h post inoculation 56
12.9 99.8 GSM147738 Vitis aestivalis 'Norton ' mock inoculated at 0 h post inoculation 67
12.1 99.8 GSM147714 Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 0 h post inoculation 43
10.1 99.6 GSM147720 Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 0 h post inoculation 49
9.4 99.6 GSM147732 Vitis aestivalis 'Norton ' mock inoculated at 0 h post inoculation 61
9.2 99.5 GSM147726 Vitis aestivalis 'Norton ' mock inoculated at 0 h post inoculation 55
8.5 99.4 GSM147709 Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 4 h post inoculation 38
7.6 99.3 GSM147715 Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 4 h post inoculation 44
6.6 98.9 GSM147742 Vitis aestivalis 'Norton ' mock inoculated at 24 h post inoculation 71
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.16 2e-17 87 1610722_at BQ797980 hypothetical protein LOC100255644 - 7e-2 At1g58122 CPuORF45 (Conserved peptide upstream open reading frame 45) C.G. S.X.
0.26 3e-10 63 1620063_at CB921343 beta-1,3-glucanase - 2e+0 At3g63530 BB (BIG BROTHER) C.G. S.X.
0.18 8e-8 56 1618425_at BQ795646 beta 1-3 glucanase - 6e-1 At1g43890 ATRAB18 (ARABIDOPSIS RAB GTPASE HOMOLOG B18) C.G. S.X.
0.10 2e-2 38 1615595_at AF239617.2 class I beta-1,3-glucanase - 3e-3 At4g16260 catalytic/ cation binding / hydrolase, hydrolyzing O-glycosyl compounds C.G. S.X.
0.03 7e-2 36 1618519_at CF214731 hypothetical protein LOC100253375 - 3e-5 At5g49300 zinc finger (GATA type) family protein C.G. S.X.
0.01 1e+0 32 1618981_at BQ797430 hypothetical protein LOC100261093 - 2e-35 At5g14780 FDH (FORMATE DEHYDROGENASE) C.G. S.X.
0.03 1e+0 32 1617808_at CF568855 - - 1e+0 At5g03170 FLA11 C.G. S.X.
0.02 1e+0 32 1617063_at CB969729 hypothetical protein LOC100245032 - 2e-10 At5g04590 SIR C.G. S.X.
0.03 1e+0 32 1613596_at CB915257 hypothetical protein LOC100261591 - 3e-29 At1g32790 RNA-binding protein, putative C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.05 2e-1 36 Arabidopsis thaliana At4g21213 6240429 unknown protein F:unknown;P:unknown;C:unknown - - - C.G. S.X.
0.11 3e-1 36 Glycine max GmaAffx.93073.1.S1_s_at CF808798 beta-1,3-endoglucanase - 6e-1 At3g57260 BGL2 (BETA-1,3-GLUCANASE 2) C.G. S.X.
0.05 3e-2 38 Hordeum vulgare HVSMEg0017E11r2_x_at HVSMEg0017E11r2 - - 3e+0 At4g08390 SAPX (STROMAL ASCORBATE PEROXIDASE) C.G. S.X.
0.03 5e-4 46 Oryza sativa OsAffx.21887.1.S1_s_at - - - 0 C.G. S.X.
0.11 2e-8 59 Populus trichocarpa PtpAffx.32356.3.S1_at DN494535 hypothetical protein - 2e-4 At3g57270 BG1 (BETA-1,3-GLUCANASE 1) C.G. S.X.
0.05 7e-2 38 Triticum aestivum Ta.24427.1.S1_at CA639959 Wgluc5 protein - 3e+0 At1g19320 pathogenesis-related thaumatin family protein C.G. S.X.
0.03 4e-1 34 Zea mays Zm.9832.1.A1_at BM340381 hypothetical protein LOC100279963 - 4e+0 At5g65166 unknown protein C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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