Gene omics information

Query gene ID	1619805_at
Gene name	similar to leucine-rich repeat protein-related
Organism	Vitis vinifera

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.59	80.6	1619805_at	CB976900	similar to leucine-rich repeat protein-related	-	4e-9	At1g25570	leucine-rich repeat protein-related	S.X.	H.G.	Please select
0.67	87.9	1617552_at	CF202269.1	hypothetical protein LOC100243817	-	4e-35	At4g35020	ARAC3 (ARABIDOPSIS RAC-LIKE 3)	S.X.	H.G.	Please select
0.59	80.6	1621770_at	CB978874	-	-	1e+0	At1g10030	ERG28 (Arabidopsis homolog of yeast ergosterol28)	S.X.	H.G.	Please select
0.47	67.7	1609811_at	CF208639	-	-	4e+0	At5g37850	SOS4 (SALT OVERLY SENSITIVE 4)	S.X.	H.G.	Please select
0.42	60.1	1621992_s_at	BQ793824	hypothetical protein LOC100259183	-	2e-11	At5g66290	unknown protein	S.X.	H.G.	Please select
0.40	57.7	1621019_at	CF201902.1	-	-	1e+0	At5g65360	histone H3	S.X.	H.G.	Please select
0.36	50.7	1609018_at	CF204139.1	-	-	1e+0	At3g44580	unknown protein	S.X.	H.G.	Please select
0.31	41.3	1621651_at	CB345580	-	-	1e+0	At4g01310	ribosomal protein L5 family protein	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
7.1	99.1	GSM147723	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation	52
6.4	98.9	GSM147711	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation	40
6.0	98.7	GSM147741	Vitis aestivalis 'Norton ' mock inoculated at 12 h post inoculation	70
5.4	98.3	GSM147739	Vitis aestivalis 'Norton ' mock inoculated at 4 h post inoculation	68
5.2	98.2	GSM147740	Vitis aestivalis 'Norton ' mock inoculated at 8 h post inoculation	69
5.2	98.2	GSM147735	Vitis aestivalis 'Norton ' mock inoculated at 12 h post inoculation	64
5.2	98.2	GSM147743	Vitis aestivalis 'Norton ' mock inoculated at 48 h post inoculation	72
5.1	98.1	GSM147716	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation	45
5.0	98.0	GSM147729	Vitis aestivalis 'Norton ' mock inoculated at 12 h post inoculation	58
4.9	97.9	GSM147717	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation	46

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.02	1e+0	32	1607831_at	BQ799075	hypothetical protein LOC100249242	-	8e-7	At3g03950	protein binding	C.G.	S.X.	Please select
0.02	1e+0	32	1607604_at	CF213890	hypothetical protein LOC100241723	-	1e-14	At5g17760	AAA-type ATPase family protein	C.G.	S.X.	Please select
0.01	5e+0	30	1622468_at	CF512400	-	-	4e-51	Atcg01120	-	C.G.	S.X.	Please select
0.02	5e+0	30	1621559_at	CF415172	hypothetical protein LOC100262734	-	3e-51	At3g28860	ABCB19	C.G.	S.X.	Please select
0.03	5e+0	30	1620829_at	CB979584	-	-	2e-1	At5g33390	glycine-rich protein	C.G.	S.X.	Please select
0.02	5e+0	30	1620149_at	CB972811	hypothetical protein LOC100265385	-	2e-9	At3g61580	delta-8 sphingolipid desaturase (SLD1)	C.G.	S.X.	Please select
0.03	5e+0	30	1619862_at	CB979196	hypothetical protein LOC100251016	-	3e-1	At4g32470	ubiquinol-cytochrome C reductase complex 14 kDa protein, putative	C.G.	S.X.	Please select
0.03	5e+0	30	1616938_at	CA814215	-	-	9e-1	At5g38470	DNA repair protein RAD23, putative	C.G.	S.X.	Please select
0.02	5e+0	30	1616659_at	CF074513	hypothetical protein LOC100261927	-	4e-21	At2g13360	AGT (ALANINE:GLYOXYLATE AMINOTRANSFERASE)	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.06	4e-9	61	Arabidopsis thaliana	At1g25570	839144	leucine-rich repeat protein-related	F:protein binding;P:unknown;C:plasma membrane, vacuole;POBMFA	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.04	5e+0	32	Glycine max	Gma.12451.1.S1_at	CD395519	-	-	1e+0	At4g39500	CYP96A11	C.G.	S.X.	Please select
0.04	5e-1	34	Hordeum vulgare	Contig11592_x_at	Contig11592	-	-	1e+1	Atcg00800	-	C.G.	S.X.	Please select
0.02	8e+0	32	Oryza sativa	Os01g0785600	AK111308.1	-	Conserved hypothetical protein	7e+0	At3g19460	reticulon family protein (RTNLB11)	C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.12	1e-19	97	Populus trichocarpa	PtpAffx.107388.2.A1_a_at	CX168588	hypothetical protein	-	4e-19	At1g25570	leucine-rich repeat protein-related	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.04	3e-1	36	Triticum aestivum	Ta.17923.1.S1_at	CA625831	-	-	3e+0	At5g23030	TET12 (TETRASPANIN12)	C.G.	S.X.	Please select
0.04	7e+0	30	Zea mays	ZmAffx.1354.1.S1_at	40794996-157	-	-	3e+0	At4g07940	unknown protein	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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