Gene omics information

Query gene ID	1619744_at
Gene name	hypothetical protein LOC100249117
Organism	Vitis vinifera

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.67	87.9	1619744_at	CF208885	hypothetical protein LOC100249117	-	2e-94	At1g18070	EF-1-alpha-related GTP-binding protein, putative	S.X.	H.G.	Please select
0.70	88.6	1613829_at	CF213502	hypothetical protein LOC100256716	-	6e-18	At1g57620	emp24/gp25L/p24 family protein	S.X.	H.G.	Please select
0.64	84.7	1609821_at	CF212296	-	-	5e-6	At3g60250	CKB3	S.X.	H.G.	Please select
0.59	80.6	1606962_at	CF405430	hypothetical protein LOC100244131	-	4e-13	At5g14240	-	S.X.	H.G.	Please select
0.53	75.2	1618974_at	CF518903	hypothetical protein LOC100264692	-	9e-40	At5g11900	eukaryotic translation initiation factor SUI1 family protein	S.X.	H.G.	Please select
0.53	75.2	1614380_at	CD797929	hypothetical protein LOC100267715	-	2e-1	At2g17770	ATBZIP27	S.X.	H.G.	Please select
0.50	72.7	1611670_at	BQ797758	hypothetical protein LOC100241885	-	9e-70	At5g54750	transport protein particle (TRAPP) component Bet3, putative	S.X.	H.G.	Please select
0.50	72.7	1612909_at	CF404929	hypothetical protein LOC100264659	-	3e-8	At3g28970	AAR3 (antiauxin-resistant 3)	S.X.	H.G.	Please select
0.50	72.7	1622560_at	CF211302	hypothetical protein LOC100265315	-	3e-27	At3g52850	VSR1 (VACUOLAR SORTING RECEPTOR HOMOLOG 1)	S.X.	H.G.	Please select
0.50	72.7	1607141_at	CD712648	hypothetical protein LOC100254376	-	1e-77	At5g19990	RPT6A (REGULATORY PARTICLE TRIPLE-A ATPASE 6A)	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
3.1	94.6	GSM322368	genotype: Incrocio Manzoni - disease type: Bois Noir infected - rep2	GSE12842	Gene expression in grapevine in response to Bois noir infection
3.0	94.2	GSM287903	Red soft berry A7 from plant 2 cluster distal position, biological rep 1	GSE11406	Expression data in individual grape berries during ripening initation
2.6	92.5	GSM287902	Red soft berry C30 from plant 2 cluster proximal position, biological rep 2	GSE11406	Expression data in individual grape berries during ripening initation
2.2	89.9	GSM287883	Green soft berry A23 from plant 1 cluster distal position, biological rep 1	GSE11406	Expression data in individual grape berries during ripening initation
2.1	89.1	GSM287889	Pink soft berry B8 from plant 1 cluster proximal position, biological rep 1	GSE11406	Expression data in individual grape berries during ripening initation
2.1	89.1	GSM287899	Red soft berry C13 from plant 1 cluster proximal position, biological rep 2	GSE11406	Expression data in individual grape berries during ripening initation
2.1	89.1	GSM287900	Red soft berry C15 from plant 1 cluster distal position, biological rep 1	GSE11406	Expression data in individual grape berries during ripening initation
2.0	88.2	GSM287901	Red soft berry C16 from plant 1 cluster distal position, biological rep 2	GSE11406	Expression data in individual grape berries during ripening initation
1.9	87.2	GSM287884	Green soft berry C7 from plant 1 cluster distal position, biological rep 2	GSE11406	Expression data in individual grape berries during ripening initation
1.9	87.2	GSM287897	Red soft berry C29 from plant 2 cluster proximal position, biological rep 1	GSE11406	Expression data in individual grape berries during ripening initation

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.06	7e-39	161	1611817_at	CF205300.1	-	-	4e-13	At1g18070	EF-1-alpha-related GTP-binding protein, putative	C.G.	S.X.	Please select
0.07	9e-26	117	1621717_at	CF518880	-	-	4e+0	At5g03495	nucleotide binding	C.G.	S.X.	Please select
0.01	1e+0	34	1619636_at	CB004373	hypothetical protein LOC100262988	-	2e+0	At5g28610	-	C.G.	S.X.	Please select
0.01	1e+0	34	1616052_at	CD720441	-	-	1e+0	At2g45570	CYP76C2	C.G.	S.X.	Please select
0.01	1e+0	34	1615859_at	CB349552	-	-	1e+0	At2g44700	kelch repeat-containing F-box family protein	C.G.	S.X.	Please select
0.01	1e+0	34	1614550_at	CB969128	hypothetical protein LOC100247670	-	1e-1	At3g61400	2-oxoglutarate-dependent dioxygenase, putative	C.G.	S.X.	Please select
0.01	1e+0	34	1613849_at	CB837392	-	-	1e+0	At5g22860	serine carboxypeptidase S28 family protein	C.G.	S.X.	Please select
0.01	1e+0	34	1614007_at	CF211136	-	-	6e-2	At2g04380	unknown protein	C.G.	S.X.	Please select
0.01	1e+0	34	1612779_at	CF207462	hypothetical protein LOC100248098	-	4e-61	At1g60995	unknown protein	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.36	2e-94	347	Arabidopsis thaliana	At1g18070	838387	EF-1-alpha-related GTP-binding protein, putative	F:translation factor activity, nucleic acid binding, GTP binding, translation release factor activity, GTPase activity;P:translational termination;C:vacuole;BMOFPA	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.45	1e-111	404	Glycine max	GmaAffx.48770.1.S1_at	BG046039	-	-	5e-50	At1g18070	EF-1-alpha-related GTP-binding protein, putative	C.G.	S.X.	Please select
0.17	2e-22	107	Hordeum vulgare	Contig10496_at	Contig10496	-	-	1e-17	At1g18070	EF-1-alpha-related GTP-binding protein, putative	C.G.	S.X.	Please select
0.33	3e-82	307	Oryza sativa	Os.16925.1.S2_at	-	-	-	0			C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.51	0	815	Populus trichocarpa	PtpAffx.70877.1.S1_at	CK091176	hypothetical protein	-	3e-112	At1g18070	EF-1-alpha-related GTP-binding protein, putative	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.29	4e-40	167	Triticum aestivum	Ta.7532.2.S1_at	CD928299	GTP-binding protein	-	2e-29	At1g18070	EF-1-alpha-related GTP-binding protein, putative	C.G.	S.X.	Please select
0.07	6e-28	125	Zea mays	Zm.7074.2.A1_at	CK368645	-	-	1e-2	At1g18070	EF-1-alpha-related GTP-binding protein, putative	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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