Gene omics information

Query gene ID 1619620_at
Gene name hypothetical protein LOC100256257
Organism Vitis vinifera


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.5779.81619620_atCB348520hypothetical protein LOC100256257-2e-1At3g22380TIC (TIME FOR COFFEE)S.X.H.G.
0.7189.51612962_atBQ794726--2e-2At5g3553040S ribosomal protein S3 (RPS3C)S.X.H.G.
0.6787.91612660_atCB980017hypothetical protein LOC100244096-1e-39At1g20960emb1507 (embryo defective 1507)S.X.H.G.
0.5779.81618340_atCF517343--4e+0At4g25040integral membrane family proteinS.X.H.G.
0.5072.71619680_atCB975224hypothetical protein LOC100254201-2e+0At3g14480glycine/proline-rich proteinS.X.H.G.
0.4260.11620494_atCF414991--1e+0At5g55190RAN3 (RAN GTPASE 3)S.X.H.G.
0.3954.91611458_atCF207715hypothetical protein LOC100243644-2e-18At2g35530bZIP transcription factor family proteinS.X.H.G.
0.3243.11619784_atCF209299hypothetical protein LOC100248174-2e-9At5g23450ATLCBK1 (A. THALIANA LONG-CHAIN BASE (LCB) KINASE 1)S.X.H.G.
0.2937.71622061_atCD798716hypothetical protein LOC100264484-3e-10At1g59820ALA3 (Aminophospholipid ATPase3)S.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
4.397.2GSM322367genotype: Incrocio Manzoni - disease type: Bois Noir infected - rep1GSE12842Gene expression in grapevine in response to Bois noir infection
2.793.0GSM147717Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation46
2.692.5GSM436428V. riparia (VR, PI588259) SD, 13h 42 days - rep2GSE17502Photoperiod regulation of grape bud dormancy
2.591.9GSM436429V. riparia (VR, PI588259) SD, 13h 42 days - rep3GSE17502Photoperiod regulation of grape bud dormancy
2.491.3GSM147735Vitis aestivalis 'Norton ' mock inoculated at 12 h post inoculation64
2.491.3GSM436427V. riparia (VR, PI588259) SD, 13h 42 days - rep1GSE17502Photoperiod regulation of grape bud dormancy
2.390.7GSM436412V. riparia (VR, PI588259) SD, 13h 3 days - rep1GSE17502Photoperiod regulation of grape bud dormancy
2.390.7GSM147742Vitis aestivalis 'Norton ' mock inoculated at 24 h post inoculation71
2.289.9GSM436401V. riparia (VR, PI588259) LD, 15h 21 days - rep2GSE17502Photoperiod regulation of grape bud dormancy
2.289.9GSM436402V. riparia (VR, PI588259) LD, 15h 21 days - rep3GSE17502Photoperiod regulation of grape bud dormancy
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.242e-501981622804_atCB035779--2e+0At5g5729060S acidic ribosomal protein P3 (RPP3B)C.G.S.X.
0.242e-501981619053_s_atCB035779hypothetical protein LOC100256257-2e+0At5g5729060S acidic ribosomal protein P3 (RPP3B)C.G.S.X.
0.022e-1361610362_atCA813623--2e-6At3g12900oxidoreductase, 2OG-Fe(II) oxygenase family proteinC.G.S.X.
0.027e-1341610460_atCB002973hypothetical protein LOC100252166-4e-1At3g50330HEC2 (HECATE 2)C.G.S.X.
0.017e-1341608031_atBQ792714hypothetical protein LOC100253247-4e-20At5g03540ATEXO70A1 (exocyst subunit EXO70 family protein A1)C.G.S.X.
0.027e-1341606641_atCB002973--4e-1At3g50330HEC2 (HECATE 2)C.G.S.X.
0.013e+0321614416_atCD013543hypothetical protein LOC100244960-8e-6At5g58900myb family transcription factorC.G.S.X.
0.023e+0321613206_atCF516257--7e-86At4g31750WIN2 (HOPW1-1-INTERACTING 2)C.G.S.X.
0.023e+0321611598_atCB970208hypothetical protein LOC100244034-7e+0At5g38630ACYB-1C.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.022e-138Arabidopsis thalianaAt3g22380821807TIC (TIME FOR COFFEE)Encodes a nucleus-acting plant-specific clock regulator working close to the central oscillator and affecting the circadian gating of light responses. Circadian gating is the alteration of circadian phase according to the photoperiod of the entraining day/light cycle and the rhythmic antagonism of light responses in the early subjective night. TIC differentially regulates CCA1 and PRR9 from LHY, with LHY expression as a dominant genetic target of TIC action.---C.G.S.X.
0.039e-136Glycine maxGma.17136.1.S1_s_atBE022719--6e-1At1g34270exostosin family proteinC.G.S.X.
0.033e-136Hordeum vulgareContig14108_atContig14108--2e-2At1g76010nucleic acid bindingC.G.S.X.
0.031e+036Oryza sativaOsAffx.21033.1.S1_at---0C.G.S.X.
0.102e-448Populus trichocarpaPtpAffx.208791.1.S1_atpmrna17425hypothetical protein-4e-2At2g37470histone H2B, putativeC.G.S.X.
0.033e+034Triticum aestivumTa.23778.2.S1_a_atBJ275521--1e-3At5g63550-C.G.S.X.
0.024e+032Zea maysZm.6051.2.S1_atAW400198--8e-1At2g24060translation initiation factor 3 (IF-3) family proteinC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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