Gene omics information

Query gene ID	1619598_at
Gene name	hypothetical protein LOC100249152
Organism	Vitis vinifera

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.63	84.3	1619598_at	BQ792469	hypothetical protein LOC100249152	-	1e+0	At4g03170	DNA binding	S.X.	H.G.	Please select
0.44	64.1	1612787_at	BQ798474	hypothetical protein LOC100241927	-	4e+0	At5g58790	unknown protein	S.X.	H.G.	Please select
0.40	57.7	1619096_at	CB969616	hypothetical protein LOC100262646	-	1e-7	At4g24270	RNA recognition motif (RRM)-containing protein	S.X.	H.G.	Please select
0.38	53.6	1614808_at	BQ792403	hypothetical protein LOC100253735	-	2e-15	At1g53280	DJ-1 family protein	S.X.	H.G.	Please select
0.35	48.5	1620256_at	AF021808.1	sucrose transporter-like	-	2e-29	At1g09960	SUT4 (SUCROSE TRANSPORTER 4)	S.X.	H.G.	Please select
0.13	13.3	1613293_at	CF518513	hypothetical protein LOC100251356	-	5e-10	At4g11560	bromo-adjacent homology (BAH) domain-containing protein	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
4.4	97.3	GSM287866	Green hard berry B21 from plant 1 cluster proximal position, biological rep 1	GSE11406	Expression data in individual grape berries during ripening initation
4.4	97.3	GSM287873	Green hard berry B9 from plant 2 cluster proximal position, biological rep 1	GSE11406	Expression data in individual grape berries during ripening initation
4.1	96.9	GSM287869	Green hard berry C3 from plant 1 cluster distal position, biological rep 1	GSE11406	Expression data in individual grape berries during ripening initation
3.8	96.4	GSM287888	Green soft berry C24 from plant 2 cluster distal position, biological rep 2	GSE11406	Expression data in individual grape berries during ripening initation
3.4	95.5	GSM287867	Green hard berry C1 from plant 1 cluster proximal position, biological rep 2	GSE11406	Expression data in individual grape berries during ripening initation
3.3	95.2	GSM287871	Green hard berry C4 from plant 1 cluster distal position, biological rep 2	GSE11406	Expression data in individual grape berries during ripening initation
3.1	94.6	GSM287885	Green soft berry A22 from plant 2 cluster proximal position, biological rep 1	GSE11406	Expression data in individual grape berries during ripening initation
3.1	94.6	GSM287875	Green hard berry C17 from plant 2 cluster proximal position, biological rep 2	GSE11406	Expression data in individual grape berries during ripening initation
3.0	94.2	GSM287881	Green soft berry B10 from plant 1 cluster proximal position, biological rep 1	GSE11406	Expression data in individual grape berries during ripening initation
2.9	93.8	GSM287883	Green soft berry A23 from plant 1 cluster distal position, biological rep 1	GSE11406	Expression data in individual grape berries during ripening initation

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.04	3e-1	34	1620871_at	CF511262	-	-	2e+1	At5g56070	unknown protein	C.G.	S.X.	Please select
0.03	3e-1	34	1620292_at	CA817018	hypothetical protein LOC100264686	-	3e-1	At2g45434	unknown protein	C.G.	S.X.	Please select
0.02	3e-1	34	1617142_at	CB003735	-	-	1e-1	At2g31740	methyltransferase	C.G.	S.X.	Please select
0.02	3e-1	34	1613277_at	CB003735	-	-	1e-1	At2g31740	methyltransferase	C.G.	S.X.	Please select
0.03	1e+0	32	1622835_at	CB919289	-	-	2e-5	At5g19000	ATBPM1 (BTB-POZ and MATH domain 1)	C.G.	S.X.	Please select
0.03	1e+0	32	1619024_at	CB919289	hypothetical protein LOC100240933	-	2e-5	At5g19000	ATBPM1 (BTB-POZ and MATH domain 1)	C.G.	S.X.	Please select
0.03	1e+0	32	1613951_at	CF404624	hypothetical protein LOC100242676	-	1e-13	At3g06350	MEE32 (MATERNAL EFFECT EMBRYO ARREST 32)	C.G.	S.X.	Please select
0.02	1e+0	32	1609210_at	CF519053	hypothetical protein LOC100247807	-	1e-1	At5g02510	unknown protein	C.G.	S.X.	Please select
0.02	1e+0	32	1608834_at	CB348757	hypothetical protein LOC100241257	-	2e-16	At5g14030	translocon-associated protein beta (TRAPB) family protein	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.03	1e+0	34	Arabidopsis thaliana	At4g03170	828050	DNA binding	F:DNA binding;P:regulation of transcription, DNA-dependent;C:cellular_component unknown;OPMF	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.03	4e-1	36	Glycine max	HgAffx.9300.1.S1_at	CB379201	-	-	5e+0	At5g51080	RNase H domain-containing protein	C.G.	S.X.	Please select
0.04	8e+0	30	Hordeum vulgare	Contig24783_at	Contig24783	-	-	3e-2	At5g15460	MUB2 (MEMBRANE-ANCHORED UBIQUITIN-FOLD PROTEIN 2)	C.G.	S.X.	Please select
0.03	8e+0	32	Oryza sativa	Os09g0462800	9637.m02538	-	Serin carboxypeptidase-like protein	3e+0	At5g52390	photoassimilate-responsive protein, putative	C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.03	1e+0	34	Populus trichocarpa	PtpAffx.2021.1.A1_at	CK095229	-	-	7e+0	At5g16567	unknown protein	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.03	4e+0	32	Triticum aestivum	TaAffx.8518.1.S1_at	CA624167	-	-	3e-1	At1g49140	NADH-ubiquinone oxidoreductase-related	C.G.	S.X.	Please select
0.03	7e+0	30	Zea mays	Zm.5507.1.A1_at	AI622315	hypothetical protein LOC100276819	-	5e+0	At5g02420	unknown protein	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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