CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID 1619581_at

Gene name

Organism Vitis vinifera

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.95 99.6 1619581_at CB980639 - - 4e+0 At4g24130 unknown protein S.X. H.G.
0.40 57.7 1616615_at CD801972 hypothetical protein LOC100268085 - 3e-39 At2g44040 dihydrodipicolinate reductase family protein S.X. H.G.
0.38 53.6 1615291_at BQ793258 hypothetical protein LOC100265858 - 3e-8 At3g05100 - S.X. H.G.
0.19 20.9 1622812_at CF516709 similar to SAB - 1e+0 At2g35470 unknown protein S.X. H.G.
0.19 20.9 1617773_at CB978900 hypothetical protein LOC100245942 - 1e+0 At2g47060 serine/threonine protein kinase, putative S.X. H.G.
0.17 18.2 1616726_at BQ793969 hypothetical protein LOC100255605 - 8e-11 At2g15290 TIC21 (TRANSLOCON AT INNER MEMBRANE OF CHLOROPLASTS 21) S.X. H.G.
0.15 15.6 1609640_at CF513267 hypothetical protein LOC100244109 - 7e-24 At5g11340 GCN5-related N-acetyltransferase (GNAT) family protein S.X. H.G.
0.10 10.3 1615906_at CF208812 hypothetical protein LOC100248563 - 3e-3 At2g47410 nucleotide binding S.X. H.G.
0.10 10.3 1608788_at CF414358 hypothetical protein LOC100244969 - 2e-5 At5g65250 unknown protein S.X. H.G.
0.07 7.8 1616298_at CF213113 - - 1e-18 At3g56900 aladin-related / adracalin-related S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
5.1 98.1 GSM147708 Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 0 h post inoculation 37
4.9 97.9 GSM147728 Vitis aestivalis 'Norton ' mock inoculated at 8 h post inoculation 57
4.8 97.8 GSM147727 Vitis aestivalis 'Norton ' mock inoculated at 4 h post inoculation 56
4.1 96.9 GSM436429 V. riparia (VR, PI588259) SD, 13h 42 days - rep3 GSE17502 Photoperiod regulation of grape bud dormancy
3.9 96.6 GSM147721 Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 4 h post inoculation 50
3.2 94.9 GSM147722 Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation 51
3.2 94.9 GSM147720 Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 0 h post inoculation 49
3.2 94.9 GSM147726 Vitis aestivalis 'Norton ' mock inoculated at 0 h post inoculation 55
3.1 94.6 GSM147742 Vitis aestivalis 'Norton ' mock inoculated at 24 h post inoculation 71
3.1 94.6 GSM436422 V. riparia (VR, PI588259) SD, 13h 21 days - rep2 GSE17502 Photoperiod regulation of grape bud dormancy
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.04 7e-2 36 1618057_at CF207962 hypothetical protein LOC100265221 - 4e+0 At5g49410 unknown protein C.G. S.X.
0.03 1e+0 32 1622088_at CD720317 - - 3e-1 At2g21370 xylulose kinase, putative C.G. S.X.
0.03 1e+0 32 1621317_at CF514922 similar to F10B6.22 - 2e-27 At1g14810 semialdehyde dehydrogenase family protein C.G. S.X.
0.03 1e+0 32 1619921_at CF371680 hypothetical protein LOC100245497 - 4e-7 At1g62640 KAS III (3-KETOACYL-ACYL CARRIER PROTEIN SYNTHASE III) C.G. S.X.
0.03 1e+0 32 1618293_at CD720317 - - 3e-1 At2g21370 xylulose kinase, putative C.G. S.X.
0.03 1e+0 32 1609729_at CB979079 hypothetical protein LOC100244928 - 2e+0 At5g04620 ATBIOF (BIOTIN F) C.G. S.X.
0.02 5e+0 30 1622627_at CB002721 - - 8e+0 At4g10895 Expressed protein C.G. S.X.
0.03 5e+0 30 1619500_at CF404052 - - 6e-2 At2g27710 60S acidic ribosomal protein P2 (RPP2B) C.G. S.X.
0.02 5e+0 30 1618126_at CF213298 hypothetical protein LOC100261549 - 3e-8 At1g76660 - C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.03 4e+0 32 Arabidopsis thaliana At4g24130 828513 unknown protein F:unknown;P:biological_process unknown;C:nucleus;P - - - C.G. S.X.
0.07 2e-6 54 Glycine max Gma.6893.1.A1_at CD418129 - - 4e-13 At4g34090 unknown protein C.G. S.X.
0.03 8e+0 30 Hordeum vulgare HVSMEi0012P14r2_x_at HVSMEi0012P14r2 - - 8e-1 At4g02850 phenazine biosynthesis PhzC/PhzF family protein C.G. S.X.
0.04 2e+0 34 Oryza sativa OsAffx.10745.1.S1_at - - - 0 C.G. S.X.
0.18 3e-23 109 Populus trichocarpa PtpAffx.201156.1.S1_at pmrna2270 - - 7e-6 At4g34090 unknown protein C.G. S.X.
0.04 1e+0 34 Triticum aestivum TaAffx.107002.1.S1_at CA707909 - - 3e+0 At5g63135 unknown protein C.G. S.X.
0.09 5e-10 63 Zea mays Zm.4925.1.A1_at BQ538657 hypothetical protein LOC100193975 - 1e+0 At5g08565 positive transcription elongation factor/ zinc ion binding C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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