CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID 1619577_at

Gene name hypothetical protein LOC100266782

Organism Vitis vinifera

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.71 89.5 1619577_at CF213082 hypothetical protein LOC100266782 - 1e+0 At4g28950 ROP9 (RHO-RELATED PROTEIN FROM PLANTS 9) S.X. H.G.
0.80 93.6 1616425_at CF208709 hypothetical protein LOC100260616 - 5e-7 At2g32730 26S proteasome regulatory subunit, putative S.X. H.G.
0.67 87.9 1617343_s_at CB972670 - - 4e+0 At5g65870 ATPSK5 (PHYTOSULFOKINE 5 PRECURSOR) S.X. H.G.
0.67 87.9 1611308_at CF202925.1 hypothetical protein LOC100248182 - 6e-4 At3g47810 MAG1 (MAIGO 1) S.X. H.G.
0.67 87.9 1606938_at CD802354 hypothetical protein LOC100265256 - 4e-72 At1g52740 HTA9 (HISTONE H2A PROTEIN 9) S.X. H.G.
0.67 87.9 1617631_at CD798963 hypothetical protein LOC100264042 - 8e-9 At2g42210 mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family protein S.X. H.G.
0.61 83.2 1620509_at CF213694 hypothetical protein LOC100248585 - 2e-21 At4g39220 ATRER1A S.X. H.G.
0.60 81.9 1618016_at CB350120 hypothetical protein LOC100247325 - 3e-1 At5g35740 glycosyl hydrolase family protein 17 S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
4.1 96.9 GSM147716 Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation 45
4.1 96.9 GSM147740 Vitis aestivalis 'Norton ' mock inoculated at 8 h post inoculation 69
3.8 96.4 GSM147743 Vitis aestivalis 'Norton ' mock inoculated at 48 h post inoculation 72
3.8 96.4 GSM147722 Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation 51
3.7 96.2 GSM147717 Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation 46
3.3 95.2 GSM147739 Vitis aestivalis 'Norton ' mock inoculated at 4 h post inoculation 68
3.3 95.2 GSM147742 Vitis aestivalis 'Norton ' mock inoculated at 24 h post inoculation 71
3.1 94.6 GSM147709 Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 4 h post inoculation 38
3.1 94.6 GSM147728 Vitis aestivalis 'Norton ' mock inoculated at 8 h post inoculation 57
3.0 94.2 GSM147710 Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation 39
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.03 1e+0 32 1612470_at CF209821 - - 2e-1 At5g03100 F-box family protein C.G. S.X.
0.03 1e+0 32 1610424_at CF568922 - - 8e-23 At3g22850 unknown protein C.G. S.X.
0.01 1e+0 32 1609350_at CF405015 hypothetical protein LOC100241300 - 9e-7 At5g23340 - C.G. S.X.
0.02 5e+0 30 1619281_at CB981270 hypothetical protein LOC100257172 - 5e-1 At3g57080 NRPE5 C.G. S.X.
0.02 5e+0 30 1611969_at CF513079 - - 2e+0 At5g43401 - C.G. S.X.
0.01 5e+0 30 1611248_at CD797306 hypothetical protein LOC100241262 - 6e-54 At5g56130 transducin family protein / WD-40 repeat family protein C.G. S.X.
0.01 2e+1 28 1622468_at CF512400 - - 4e-51 Atcg01120 - C.G. S.X.
0.03 2e+1 28 1620805_at CB344295 - - 1e-21 Atcg00650 - C.G. S.X.
0.02 2e+1 28 1620295_at CD715567 - - 9e-11 At5g47040 LON2 (LON PROTEASE 2) C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.03 1e+0 34 Arabidopsis thaliana At4g28950 829016 ROP9 (RHO-RELATED PROTEIN FROM PLANTS 9) A member of ROP GTPase gene family. - - - C.G. S.X.
0.04 2e+0 34 Glycine max Gma.14257.1.A1_at CD418593 - - 1e+1 At5g08770 unknown protein C.G. S.X.
0.04 8e+0 30 Hordeum vulgare HT05D14u_x_at HT05D14u - - 2e+0 At3g21710 unknown protein C.G. S.X.
0.04 8e+0 32 Oryza sativa OsAffx.22147.1.S1_x_at - - - 0 C.G. S.X.
0.11 3e-8 59 Populus trichocarpa PtpAffx.4599.1.A1_at CV227174 hypothetical protein - 4e-1 At2g29050 ATRBL1 (Arabidopsis thaliana Rhomboid-like 1) C.G. S.X.
0.04 4e+0 32 Triticum aestivum TaAffx.109034.1.S1_at CA681005 - - 7e-1 At3g02242 unknown protein C.G. S.X.
0.04 2e+0 32 Zea mays Zm.1938.1.A1_at BF728861 - - 1e+1 At5g53120 SPDS3 (SPERMIDINE SYNTHASE 3) C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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