CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID 1619572_at

Gene name hypothetical protein LOC100262901

Organism Vitis vinifera

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.70 88.6 1619572_at CB002043 hypothetical protein LOC100262901 - 1e-3 At4g38090 unknown protein S.X. H.G.
0.74 91.0 1611505_at CF405131 - - 8e-1 At3g61990 O-methyltransferase family 3 protein S.X. H.G.
0.71 89.5 1612915_at CF212348 hypothetical protein LOC100247677 - 8e-115 At5g05780 RPN8A (RP NON-ATPASE SUBUNIT 8A) S.X. H.G.
0.69 88.3 1607847_at CF517305 - - 6e-50 At2g32170 - S.X. H.G.
0.64 84.7 1622052_s_at CF213694 hypothetical protein LOC100248585 - 2e-21 At4g39220 ATRER1A S.X. H.G.
0.61 83.2 1613718_s_at CF202933.1 hypothetical protein LOC100241422 - 7e+0 At5g11120 unknown protein S.X. H.G.
0.57 79.8 1619141_at CD801026 - - 2e-1 At5g42655 - S.X. H.G.
0.53 75.2 1608272_at BQ796860 hypothetical protein LOC100255032 - 3e-36 At3g56190 ALPHA-SNAP2 (ALPHA-SOLUBLE NSF ATTACHMENT PROTEIN 2) S.X. H.G.
0.53 75.2 1607450_at CB343161 hypothetical protein LOC100264463 - 1e+0 At5g11070 unknown protein S.X. H.G.
0.51 73.2 1620509_at CF213694 hypothetical protein LOC100248585 - 2e-21 At4g39220 ATRER1A S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
4.9 97.9 GSM147739 Vitis aestivalis 'Norton ' mock inoculated at 4 h post inoculation 68
4.3 97.2 GSM147742 Vitis aestivalis 'Norton ' mock inoculated at 24 h post inoculation 71
4.0 96.7 GSM147740 Vitis aestivalis 'Norton ' mock inoculated at 8 h post inoculation 69
3.9 96.6 GSM147743 Vitis aestivalis 'Norton ' mock inoculated at 48 h post inoculation 72
3.9 96.6 GSM147728 Vitis aestivalis 'Norton ' mock inoculated at 8 h post inoculation 57
3.7 96.2 GSM147723 Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation 52
3.6 96.0 GSM147738 Vitis aestivalis 'Norton ' mock inoculated at 0 h post inoculation 67
3.6 96.0 GSM147730 Vitis aestivalis 'Norton ' mock inoculated at 24 h post inoculation 59
3.5 95.7 GSM147711 Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation 40
3.5 95.7 GSM147720 Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 0 h post inoculation 49
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
1.00 0 1100 1606911_at CB002043 - - 1e-3 At4g38090 unknown protein C.G. S.X.
0.03 1e+0 32 1615169_at BQ792970 hypothetical protein LOC100258290 - 3e-1 At3g14280 unknown protein C.G. S.X.
0.02 1e+0 32 1614411_at CB969082 hypothetical protein LOC100257880 - 7e-1 At4g14890 ferredoxin family protein C.G. S.X.
0.02 1e+0 32 1611315_at CF372467 hypothetical protein LOC100261906 - 6e-49 At4g14320 60S ribosomal protein L36a/L44 (RPL36aB) C.G. S.X.
0.03 1e+0 32 1607984_at CF202815.1 - - 5e-3 At2g14160 nucleic acid binding / nucleotide binding C.G. S.X.
0.03 5e+0 30 1621948_at CB343126 - - 1e+1 At5g50710 unknown protein C.G. S.X.
0.03 5e+0 30 1621360_at CF206121.1 - - 3e+0 At2g02740 WHY3 (WHIRLY 3) C.G. S.X.
0.03 5e+0 30 1621350_at CD009838 - - 5e+0 At5g52965 unknown protein C.G. S.X.
0.02 5e+0 30 1620525_at CF415535 similar to RPL18AA (60S RIBOSOMAL PROTEIN L18A-1); structural constituent of ribosome - 5e-47 At3g14600 60S ribosomal protein L18A (RPL18aC) C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.09 1e-3 44 Arabidopsis thaliana At4g38090 829965 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;BOAMFP - - - C.G. S.X.
0.03 4e-1 36 Glycine max GmaAffx.86360.1.S1_at BG508005 - - 1e+0 At5g26280 meprin and TRAF homology domain-containing protein / MATH domain-containing protein C.G. S.X.
0.03 2e+0 32 Hordeum vulgare HT05P10u_at HT05P10u - - 4e+0 At2g01090 ubiquinol-cytochrome C reductase complex 7.8 kDa protein, putative / mitochondrial hinge protein, putative C.G. S.X.
0.02 2e+0 34 Oryza sativa Os04g0554000 9632.m04509 - - 3e-5 At4g22590 trehalose-6-phosphate phosphatase, putative C.G. S.X.
0.19 5e-13 75 Populus trichocarpa PtpAffx.207424.1.S1_at pmrna14733 hypothetical protein - 3e-23 At4g38090 unknown protein C.G. S.X.
0.04 3e-1 36 Triticum aestivum Ta.8384.2.A1_x_at BJ307294 - - 2e+1 At5g64590 unknown protein C.G. S.X.
0.04 2e+0 32 Zea mays Zm.2895.10.S1_a_at AI667767 - - 7e-30 At4g14320 60S ribosomal protein L36a/L44 (RPL36aB) C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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