Gene omics information

Query gene ID	1619555_at
Gene name	hypothetical protein LOC100250154
Organism	Vitis vinifera

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.92	99.0	1619555_at	AY395743.1	hypothetical protein LOC100250154	-	3e-61	At5g02800	protein kinase family protein	S.X.	H.G.	Please select
0.41	58.7	1614871_s_at	CF404051	hypothetical protein LOC100266189	-	7e-5	At4g32551	LUG (LEUNIG)	S.X.	H.G.	Please select
0.39	54.9	1609064_s_at	BQ797292	hypothetical protein LOC100251648	-	6e-18	At3g53570	AFC1 (ARABIDOPSIS FUS3-COMPLEMENTING GENE 1)	S.X.	H.G.	Please select
0.39	54.9	1611104_at	CB971026	hypothetical protein LOC100245612	-	2e-8	At5g63400	ADK1 (ADENYLATE KINASE 1)	S.X.	H.G.	Please select
0.38	53.6	1614869_at	CF208077	hypothetical protein LOC100251847	-	1e-12	At1g50500	HIT1 (HEAT-INTOLERANT 1)	S.X.	H.G.	Please select
0.36	50.7	1612995_at	CD012259	-	-	4e-18	At3g13340	WD-40 repeat family protein	S.X.	H.G.	Please select
0.35	48.5	1618681_at	BQ797518	hypothetical protein LOC100241923	-	1e-30	At1g49760	PAB8 (POLY(A) BINDING PROTEIN 8)	S.X.	H.G.	Please select
0.35	48.5	1621888_at	CD710781	hypothetical protein LOC100252475	-	4e-1	At5g39570	unknown protein	S.X.	H.G.	Please select
0.33	45.7	1606542_at	BQ797856	hypothetical protein LOC100250325	-	1e+0	At2g10450	14-3-3 protein, putative / grf15, putative	S.X.	H.G.	Please select
0.32	43.1	1619318_at	BQ793250	hypothetical protein LOC100248394	-	5e+0	At5g65840	-	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
2.2	89.9	GSM436400	V. riparia (VR, PI588259) LD, 15h 21 days - rep1	GSE17502	Photoperiod regulation of grape bud dormancy
2.2	89.9	GSM147678	Vitis vinifera 'Cabernet sauvignon' infected w/ powdery mildew (Erysiphe necator) conidiospores 0 h post inoculation	7
2.1	89.1	GSM436404	V. riparia (VR, PI588259) LD, 15h 28 days - rep2	GSE17502	Photoperiod regulation of grape bud dormancy
2.1	89.1	GSM436373	Seyval (SV, Seyve Villard 5-276) SD, 13h 7 days - rep1	GSE17502	Photoperiod regulation of grape bud dormancy
2.1	89.1	GSM436370	Seyval (SV, Seyve Villard 5-276) SD, 13h 3 days - rep1	GSE17502	Photoperiod regulation of grape bud dormancy
2.0	88.2	GSM299453	B_i_rep1	GSE11857	Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genes
2.0	88.2	GSM147679	Vitis vinifera 'Cabernet sauvignon' infected w/ powdery mildew (Erysiphe necator) conidiospores 4 h post inoculation	8
2.0	88.2	GSM147685	Vitis vinifera 'Cabernet sauvignon' infected w/ powdery mildew (Erysiphe necator) conidiospores 4 h post inoculation	14
1.9	87.2	GSM436355	Seyval (SV, Seyve Villard 5-276) LD, 15h 14 days - rep1	GSE17502	Photoperiod regulation of grape bud dormancy
1.9	87.2	GSM299452	B_ni_rep2	GSE11857	Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genes

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.33	8e-56	216	1621082_a_at	CF516167	hypothetical protein LOC100262185	-	3e-13	At5g02800	protein kinase family protein	C.G.	S.X.	Please select
0.03	4e-5	48	1616357_at	CF516994	hypothetical protein LOC100255530	-	5e-16	At2g17220	protein kinase, putative	C.G.	S.X.	Please select
0.03	3e-3	42	1608103_at	CD801640	hypothetical protein LOC100266523	-	3e-61	At2g47060	serine/threonine protein kinase, putative	C.G.	S.X.	Please select
0.03	1e-2	40	1615460_at	CF405945	hypothetical protein LOC100249750	-	2e-91	At1g06700	serine/threonine protein kinase, putative	C.G.	S.X.	Please select
0.04	4e-2	38	1618005_at	CD009831	-	-	1e-3	At1g48220	ATP binding / protein kinase/ protein serine/threonine kinase/ protein tyrosine kinase	C.G.	S.X.	Please select
0.04	4e-2	38	1614200_at	CD009831	hypothetical protein LOC100258356	-	1e-3	At1g48220	ATP binding / protein kinase/ protein serine/threonine kinase/ protein tyrosine kinase	C.G.	S.X.	Please select
0.02	4e-2	38	1607675_at	CD011506	hypothetical protein LOC100253466	-	3e-11	At1g07570	APK1A	C.G.	S.X.	Please select
0.03	2e-1	36	1619530_at	CF568823	-	-	2e-26	At5g58300	leucine-rich repeat transmembrane protein kinase, putative	C.G.	S.X.	Please select
0.03	2e-1	36	1607952_at	CF372631	hypothetical protein LOC100250523	-	3e-8	At1g28440	HSL1 (HAESA-Like 1)	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.45	3e-61	236	Arabidopsis thaliana	At5g02800	831285	protein kinase family protein	F:protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding;P:protein amino acid phosphorylation;C:unknown;MPOBFVA	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.47	5e-113	408	Glycine max	GmaAffx.86611.1.S1_at	BI316735	-	-	2e-34	At5g02800	protein kinase family protein	C.G.	S.X.	Please select
0.24	2e-27	123	Hordeum vulgare	Contig11724_at	Contig11724	-	-	8e-11	At5g13160	PBS1 (avrPphB susceptible 1)	C.G.	S.X.	Please select
0.34	4e-59	230	Oryza sativa	Os07g0695300	AK072806.1	-	Serine/threonine-protein kinase PBS1 (EC 2.7.1.37)(AvrPphB susceptible protein 1)	3e-22	At5g02800	protein kinase family protein	C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.55	6e-162	571	Populus trichocarpa	PtpAffx.219736.1.S1_at	pmrna35756	hypothetical protein	-	5e-45	At5g02800	protein kinase family protein	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.14	5e-17	89	Triticum aestivum	Ta.8771.1.S1_at	BQ161384	-	-	8e-7	At5g13160	PBS1 (avrPphB susceptible 1)	C.G.	S.X.	Please select
0.10	6e-2	38	Zea mays	ZmAffx.914.1.S1_at	AI770970	protein kinase APK1A	-	2e-20	At5g13160	PBS1 (avrPphB susceptible 1)	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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