Gene omics information

Query gene ID	1619548_at
Gene name
Organism	Vitis vinifera

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.91	98.8	1619548_at	CF209981	-	-	1e+0	At4g18090	unknown protein	S.X.	H.G.	Please select
0.50	72.7	1613329_at	CB969685	-	-	1e+0	At1g58160	jacalin lectin family protein	S.X.	H.G.	Please select
0.36	50.7	1620364_at	CB004253	-	-	1e+0	At2g18690	unknown protein	S.X.	H.G.	Please select
0.22	25.6	1616040_at	CF513277	-	-	6e+0	At1g57850	Toll-Interleukin-Resistance (TIR) domain-containing protein	S.X.	H.G.	Please select
0.07	7.8	1616228_at	CD717999	-	-	2e+0	At1g19086	unknown protein	S.X.	H.G.	Please select
0.00	0.5	1622268_at	CF372312	-	-	9e-16	At4g11110	SPA2 (SPA1-RELATED 2)	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
7.3	99.2	GSM147722	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation	51
6.2	98.8	GSM147732	Vitis aestivalis 'Norton ' mock inoculated at 0 h post inoculation	61
5.7	98.5	GSM147709	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 4 h post inoculation	38
5.4	98.3	GSM147730	Vitis aestivalis 'Norton ' mock inoculated at 24 h post inoculation	59
5.0	98.0	GSM147743	Vitis aestivalis 'Norton ' mock inoculated at 48 h post inoculation	72
4.9	97.9	GSM147729	Vitis aestivalis 'Norton ' mock inoculated at 12 h post inoculation	58
4.5	97.5	GSM147720	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 0 h post inoculation	49
4.3	97.2	GSM436367	Seyval (SV, Seyve Villard 5-276) SD, 13h 1 days - rep1	GSE17502	Photoperiod regulation of grape bud dormancy
4.3	97.2	GSM147721	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 4 h post inoculation	50
3.7	96.2	GSM147723	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation	52

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.30	2e-39	161	1607190_at	CB981263	-	-	1e+0	At2g35480	unknown protein	C.G.	S.X.	Please select
0.10	2e-17	87	1612519_at	CF369076	-	-	2e+0	At4g21000	ACA6 (ALPHA CARBONIC ANHYDRASE 6)	C.G.	S.X.	Please select
0.47	2e-14	77	1620177_at	CD718326	-	-	1e+0	At4g11100	unknown protein	C.G.	S.X.	Please select
0.47	2e-14	77	1616384_at	CD718326	-	-	1e+0	At4g11100	unknown protein	C.G.	S.X.	Please select
0.09	3e-4	44	1621851_at	BQ800610	-	-	1e+0	At5g63370	protein kinase family protein	C.G.	S.X.	Please select
0.09	2e-2	38	1621602_at	CF515795	-	-	1e+0	Atmg01280	-	C.G.	S.X.	Please select
0.03	7e-2	36	1619966_at	BQ794611	hypothetical protein LOC100255113	-	1e+0	At1g78020	senescence-associated protein-related	C.G.	S.X.	Please select
0.03	3e-1	34	1610364_at	BM437363	hypothetical protein LOC100256105	-	4e-10	At5g15080	protein kinase, putative	C.G.	S.X.	Please select
0.03	3e-1	34	1609572_at	CF516529	-	-	1e+0	At3g48237	unknown protein	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.03	1e+0	34	Arabidopsis thaliana	At4g18090	827534	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;OP	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.05	6e+0	32	Glycine max	HgAffx.22896.1.S1_at	BF249521	-	-	5e+0	At2g24970	unknown protein	C.G.	S.X.	Please select
0.03	2e+0	32	Hordeum vulgare	Contig8171_at	Contig8171	-	-	3e-23	At1g61780	postsynaptic protein-related	C.G.	S.X.	Please select
0.02	5e-1	36	Oryza sativa	Os01g0674500	AK070401.1	-	The start codon is not identified.	5e-11	At1g53320	AtTLP7 (TUBBY LIKE PROTEIN 7)	C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.03	1e+0	34	Populus trichocarpa	PtpAffx.147450.1.A1_at	CV237080	-	-	1e-19	At1g12910	ATAN11 (ANTHOCYANIN11)	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.04	1e+0	34	Triticum aestivum	TaAffx.79512.1.S1_at	BQ607747	-	-	7e-2	At4g15270	glucosyltransferase-related	C.G.	S.X.	Please select
0.03	2e+0	32	Zea mays	Zm.6247.1.S1_at	AF371267.1	alpha zein 19kDa D1	-	5e-1	At5g62360	invertase/pectin methylesterase inhibitor family protein	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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