Gene omics information

Query gene ID	1619484_at
Gene name	hypothetical protein LOC100245801
Organism	Vitis vinifera

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.63	84.3	1619484_at	CA814697	hypothetical protein LOC100245801	-	3e-4	At5g21482	CKX7 (CYTOKININ OXIDASE 7)	S.X.	H.G.	Please select
0.50	72.7	1619658_at	CF371851	-	-	4e-15	At2g14960	GH3.1	S.X.	H.G.	Please select
0.12	12.1	1614504_s_at	CF372317	hypothetical protein LOC100246222	-	7e+0	At5g39860	PRE1 (PACLOBUTRAZOL RESISTANCE1)	S.X.	H.G.	Please select
0.07	7.8	1617563_s_at	CF415066	-	-	2e-1	At5g27495	ion channel inhibitor	S.X.	H.G.	Please select
0.07	7.8	1620898_at	CB976503	hypothetical protein LOC100266931	-	2e-2	At3g25400	-	S.X.	H.G.	Please select
0.06	6.8	1611466_at	CF372402	hypothetical protein LOC100253536	-	7e-26	At4g19100	unknown protein	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
12.0	99.8	GSM147699	Vitis vinifera 'Cabernet sauvignon' mock inoculated at 12 h post inoculation	28
7.1	99.1	GSM147705	Vitis vinifera 'Cabernet sauvignon' mock inoculated at 12 h post inoculation	34
6.8	99.0	GSM147687	Vitis vinifera 'Cabernet sauvignon' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation	16
6.8	99.0	GSM147681	Vitis vinifera 'Cabernet sauvignon' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation	10
6.5	98.9	GSM147696	Vitis vinifera 'Cabernet sauvignon' mock inoculated at 0 h post inoculation	25
6.5	98.9	GSM147732	Vitis aestivalis 'Norton ' mock inoculated at 0 h post inoculation	61
5.5	98.4	GSM147717	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation	46
5.3	98.2	GSM147678	Vitis vinifera 'Cabernet sauvignon' infected w/ powdery mildew (Erysiphe necator) conidiospores 0 h post inoculation	7
5.0	98.0	GSM147735	Vitis aestivalis 'Norton ' mock inoculated at 12 h post inoculation	64
4.1	96.9	GSM147714	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 0 h post inoculation	43

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.02	8e-2	36	1620717_at	BQ799683	hypothetical protein LOC100255378	-	3e-15	At5g58430	ATEXO70B1 (exocyst subunit EXO70 family protein B1)	C.G.	S.X.	Please select
0.03	1e+0	32	1621753_at	CF511403	-	-	2e-1	At1g74670	gibberellin-responsive protein, putative	C.G.	S.X.	Please select
0.03	1e+0	32	1620871_at	CF511262	-	-	2e+1	At5g56070	unknown protein	C.G.	S.X.	Please select
0.03	1e+0	32	1611414_at	CB976798	hypothetical protein LOC100260196	-	1e+0	At5g23420	HMGB6	C.G.	S.X.	Please select
0.02	1e+0	32	1610817_at	CF513296	-	-	2e+0	At5g11830	-	C.G.	S.X.	Please select
0.02	1e+0	32	1610786_at	CD801392	hypothetical protein LOC100242540	-	1e-7	At4g14570	acylaminoacyl-peptidase-related	C.G.	S.X.	Please select
0.02	1e+0	32	1606573_s_at	BQ794579	hypothetical protein LOC100249473	-	3e-6	At1g51200	zinc finger (AN1-like) family protein	C.G.	S.X.	Please select
0.03	5e+0	30	1622709_s_at	CB339838	hypothetical protein LOC100263191	-	9e-57	At5g59690	histone H4	C.G.	S.X.	Please select
0.02	5e+0	30	1622533_at	CF404671	hypothetical protein LOC100248901	-	9e+0	At4g30320	allergen V5/Tpx-1-related family protein	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.07	3e-4	46	Arabidopsis thaliana	At5g21482	832248	CKX7 (CYTOKININ OXIDASE 7)	This gene used to be called AtCKX5. It encodes a protein whose sequence is similar to cytokinin oxidase/dehydrogenase, which catalyzes the degradation of cytokinins.	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.04	1e-1	38	Glycine max	Gma.12318.1.S1_at	BU547074	-	-	7e+0	Atmg01120	-	C.G.	S.X.	Please select
0.04	2e+0	32	Hordeum vulgare	HVSMEh0080E23r2_s_at	HVSMEh0080E23r2	-	-	9e+0	At5g43185	Expressed protein	C.G.	S.X.	Please select
0.05	4e-5	50	Oryza sativa	Os08g0460600	AK109251.1	-	Hypothetical protein	6e-3	At4g27310	zinc finger (B-box type) family protein	C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.05	2e-2	40	Populus trichocarpa	PtpAffx.5634.1.A1_at	CV241286	cytokinin oxidase	-	1e+0	At5g21482	CKX7 (CYTOKININ OXIDASE 7)	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.04	2e-2	40	Triticum aestivum	Ta.3495.2.S1_x_at	CA710811	-	-	4e+0	At5g37430	unknown protein	C.G.	S.X.	Please select
0.03	7e+0	30	Zea mays	Zm.9484.1.A1_at	BM269244	-	-	9e+0	At5g55330	membrane bound O-acyl transferase (MBOAT) family protein / wax synthase-related	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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