CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID 1619478_at

Gene name hypothetical protein LOC100247440

Organism Vitis vinifera

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.91 98.8 1619478_at CD004753 hypothetical protein LOC100247440 - 3e-9 At5g12010 unknown protein S.X. H.G.
0.67 87.9 1606741_at CF200678.1 hypothetical protein LOC100250551 - 5e+0 At3g20155 unknown protein S.X. H.G.
0.61 83.2 1613098_at CD716212 hypothetical protein LOC100264214 - 2e-6 At4g08950 EXO (EXORDIUM) S.X. H.G.
0.50 72.7 1621270_at CB971990 hypothetical protein LOC100252531 - 4e-4 At5g11590 TINY2 (TINY2) S.X. H.G.
0.50 72.7 1606679_at CB036068 hypothetical protein LOC100246740 - 1e-7 At4g08260 protein phosphatase 2C, putative / PP2C, putative S.X. H.G.
0.39 54.9 1609190_at BQ798327 hypothetical protein LOC100253381 - 6e+0 At3g23180 - S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
9.2 99.5 GSM436351 Seyval (SV, Seyve Villard 5-276) LD, 15h 3 days - rep3 GSE17502 Photoperiod regulation of grape bud dormancy
9.2 99.5 GSM436413 V. riparia (VR, PI588259) SD, 13h 3 days - rep2 GSE17502 Photoperiod regulation of grape bud dormancy
8.0 99.3 GSM436367 Seyval (SV, Seyve Villard 5-276) SD, 13h 1 days - rep1 GSE17502 Photoperiod regulation of grape bud dormancy
7.7 99.3 GSM147727 Vitis aestivalis 'Norton ' mock inoculated at 4 h post inoculation 56
7.6 99.3 GSM436417 V. riparia (VR, PI588259) SD, 13h 7 days - rep3 GSE17502 Photoperiod regulation of grape bud dormancy
7.0 99.1 GSM436414 V. riparia (VR, PI588259) SD, 13h 3 days - rep3 GSE17502 Photoperiod regulation of grape bud dormancy
6.6 98.9 GSM436375 Seyval (SV, Seyve Villard 5-276) SD, 13h 7 days - rep3 GSE17502 Photoperiod regulation of grape bud dormancy
6.3 98.8 GSM436393 V. riparia (VR, PI588259) LD, 15h 3 days - rep3 GSE17502 Photoperiod regulation of grape bud dormancy
6.3 98.8 GSM436391 V. riparia (VR, PI588259) LD, 15h 3 days - rep1 GSE17502 Photoperiod regulation of grape bud dormancy
5.6 98.4 GSM436370 Seyval (SV, Seyve Villard 5-276) SD, 13h 3 days - rep1 GSE17502 Photoperiod regulation of grape bud dormancy
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.25 1e-45 182 1610356_at CB980194 hypothetical protein LOC100262760 - 2e-3 At5g12010 unknown protein C.G. S.X.
0.02 2e-4 46 1610193_at CF214569 hypothetical protein LOC100242819 - 1e-53 At1g17880 nascent polypeptide-associated complex (NAC) domain-containing protein / BTF3b-like transcription factor, putative C.G. S.X.
0.02 7e-1 34 1621158_at CD721072 - - 9e-5 At1g79750 ATNADP-ME4 (NADP-malic enzyme 4) C.G. S.X.
0.01 7e-1 34 1620390_s_at AF532965.1 thaumatin-like protein /// hypothetical protein LOC100246096 /// hypothetical protein LOC100242737 - 7e+0 At5g22960 serine carboxypeptidase S10 family protein C.G. S.X.
0.01 7e-1 34 1620284_at CA817004 hypothetical protein LOC100249470 - 1e-17 At4g35220 cyclase family protein C.G. S.X.
0.02 7e-1 34 1617374_at CD721072 - - 9e-5 At1g79750 ATNADP-ME4 (NADP-malic enzyme 4) C.G. S.X.
0.02 7e-1 34 1610388_at CB004415 - - 4e+0 At5g19172 - C.G. S.X.
0.02 7e-1 34 1608974_at CB343752 - - 1e+0 At5g40700 unknown protein C.G. S.X.
0.02 7e-1 34 1606591_at CB004415 hypothetical protein LOC100263197 - 4e+0 At5g19172 - C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.14 3e-9 63 Arabidopsis thaliana At5g12010 831074 unknown protein F:unknown;P:response to salt stress;C:chloroplast, plasma membrane, membrane;MPFO - - - C.G. S.X.
0.19 8e-23 109 Glycine max GmaAffx.72063.1.S1_at AW102068 - - 7e-5 At4g29780 unknown protein C.G. S.X.
0.06 9e-14 77 Hordeum vulgare Contig4976_at Contig4976 - - 4e+0 At5g12010 unknown protein C.G. S.X.
0.09 4e-10 67 Oryza sativa Os05g0593000 AK064253.1 - Conserved hypothetical protein 8e-4 At4g29780 unknown protein C.G. S.X.
0.29 9e-35 149 Populus trichocarpa PtpAffx.206660.1.S1_at pmrna13221 hypothetical protein - 2e-23 At5g12010 unknown protein C.G. S.X.
0.12 1e-17 91 Triticum aestivum Ta.10520.1.S1_at AL828817 - - 2e-2 At4g29780 unknown protein C.G. S.X.
0.03 1e+0 34 Zea mays Zm.11770.1.A1_at BM380607 hypothetical protein LOC100191551 - 9e-5 At5g12010 unknown protein C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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