Gene omics information

Query gene ID 1619468_at
Gene name pectin methylesterase PME1
Organism Vitis vinifera


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.5779.81619468_atAY043232.1pectin methylesterase PME1-7e-8At4g33220enzyme inhibitor/ pectinesteraseS.X.H.G.
0.7591.31609870_atCB977378hypothetical protein LOC100259790-8e-56At3g60970ATMRP15S.X.H.G.
0.7189.51618333_atCD798042hypothetical protein LOC100264835-4e-3At3g63250HMT2 (HOMOCYSTEINE METHYLTRANSFERASE 2)S.X.H.G.
0.7088.61610275_atCB006658hypothetical protein LOC100246410-1e-9At3g21250ATMRP6S.X.H.G.
0.6484.71609297_atCB914618--1e-1At2g30560glycine-rich proteinS.X.H.G.
0.6484.71621395_atCD797719hypothetical protein LOC100243587 /// hypothetical protein LOC100251575-6e-7At1g78380ATGSTU19 (GLUTATHIONE S-TRANSFERASE TAU 19)S.X.H.G.
0.6384.31621201_atBQ794760--3e-1At5g03870glutaredoxin family proteinS.X.H.G.
0.5879.81608432_s_atCB004591hypothetical protein LOC100266054-3e-9At3g23690basic helix-loop-helix (bHLH) family proteinS.X.H.G.
0.5779.81619742_atAF265562.1MAD-box transcripion factor-2e-16At3g58780SHP1 (SHATTERPROOF 1)S.X.H.G.
0.5375.21613204_atAF501625.1glutathione-S-transferase /// hypothetical protein LOC100249549 /// hypothetical LOC100267917-4e-8At1g17180ATGSTU25 (GLUTATHIONE S-TRANSFERASE TAU 25)S.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
11.999.8GSM287879Green hard berry C19 from plant 2 cluster distal position, biological rep 2GSE11406Expression data in individual grape berries during ripening initation
11.299.7GSM287881Green soft berry B10 from plant 1 cluster proximal position, biological rep 1GSE11406Expression data in individual grape berries during ripening initation
10.399.6GSM287885Green soft berry A22 from plant 2 cluster proximal position, biological rep 1GSE11406Expression data in individual grape berries during ripening initation
10.099.6GSM287871Green hard berry C4 from plant 1 cluster distal position, biological rep 2GSE11406Expression data in individual grape berries during ripening initation
9.399.6GSM287886Green soft berry C22 from plant 2 cluster proximal position, biological rep 2GSE11406Expression data in individual grape berries during ripening initation
9.199.5GSM287883Green soft berry A23 from plant 1 cluster distal position, biological rep 1GSE11406Expression data in individual grape berries during ripening initation
8.199.4GSM287893Pink soft berry C12 from plant 1 cluster distal position, biological rep 2GSE11406Expression data in individual grape berries during ripening initation
8.099.3GSM287884Green soft berry C7 from plant 1 cluster distal position, biological rep 2GSE11406Expression data in individual grape berries during ripening initation
8.099.3GSM287890Pink soft berry C25 from plant 2 cluster proximal position, biological rep 1GSE11406Expression data in individual grape berries during ripening initation
7.499.2GSM287894Pink soft berry C26 from plant 2 cluster proximal position, biological rep 2GSE11406Expression data in individual grape berries during ripening initation
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.105e-431741622713_atCF404968--3e+0At4g10250ATHSP22.0C.G.S.X.
0.027e-2381622450_atCB970586--5e-7At2g45220pectinesterase family proteinC.G.S.X.
0.031e+0341616522_atCF403905hypothetical protein LOC100262892-2e-8At3g14310ATPME3C.G.S.X.
0.021e+0341615574_atCB977067hypothetical protein LOC100245304-7e-9At2g45220pectinesterase family proteinC.G.S.X.
0.011e+0341611559_atCK138184.1--4e-1At5g46915transcriptional factor B3 family proteinC.G.S.X.
0.011e+0341611400_atCF510785hypothetical protein LOC100266087-1e+0At5g30520unknown proteinC.G.S.X.
0.011e+0341609428_atCF215282hypothetical protein LOC100257037-1e-14At1g79620leucine-rich repeat transmembrane protein kinase, putativeC.G.S.X.
0.014e+0321622641_atCB008231hypothetical protein LOC100255988-3e-2At3g49300proline-rich family proteinC.G.S.X.
0.014e+0321622100_atBM436534hypothetical protein LOC100267831-5e-7At2g46690auxin-responsive family proteinC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.097e-859Arabidopsis thalianaAt4g33220829458enzyme inhibitor/ pectinesteraseF:enzyme inhibitor activity, pectinesterase activity;P:cell wall modification;C:endomembrane system, cell wall, plant-type cell wall;PBFM---C.G.S.X.
0.136e-1273Glycine maxGmaAffx.15862.1.S1_atBM092634--1e-39At4g33220enzyme inhibitor/ pectinesteraseC.G.S.X.
0.017e+032Hordeum vulgareHV11C08u_x_atHV11C08u--7e+0At3g58170BS14A (BET1P/SFT1P-LIKE PROTEIN 14A)C.G.S.X.
0.033e-861Oryza sativaOs08g0450100AK058651.1-Pectinesterase (EC 3.1.1.11) (Fragment)2e-2At1g11370pectinesterase family proteinC.G.S.X.
0.152e-21105Populus trichocarpaPtpAffx.132383.1.A1_s_atCV268088hypothetical protein-1e-1At3g43270pectinesterase family proteinC.G.S.X.
0.014e+034Triticum aestivumTaAffx.51609.1.S1_atCA722993--5e-2At5g56840DNA-binding family proteinC.G.S.X.
0.016e+032Zea maysZmAffx.1166.1.A1_atAW585299--5e-14At5g19780TUA5C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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