Gene omics information

Query gene ID	1619379_at
Gene name	hypothetical protein LOC100266779
Organism	Vitis vinifera

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.44	64.1	1619379_at	CF604687	hypothetical protein LOC100266779	-	3e-7	At1g12500	phosphate translocator-related	S.X.	H.G.	Please select
0.43	61.5	1617463_at	CF511225	hypothetical protein LOC100242878	-	2e-6	At1g52670	biotin/lipoyl attachment domain-containing protein	S.X.	H.G.	Please select
0.40	57.7	1620567_at	BQ792636	hypothetical protein LOC100242364	-	3e-154	At4g31990	ASP5 (ASPARTATE AMINOTRANSFERASE 5)	S.X.	H.G.	Please select
0.27	34.0	1614810_s_at	CF205445.1	-	-	2e-21	At5g42300	UBL5 (UBIQUITIN-LIKE PROTEIN 5)	S.X.	H.G.	Please select
0.25	30.5	1606652_at	CB969544	hypothetical protein LOC100249126	-	4e+0	At5g58787	zinc finger (C3HC4-type RING finger) family protein	S.X.	H.G.	Please select
0.20	22.4	1619083_at	CD802160	hypothetical protein LOC100267911	-	3e-1	At4g29480	mitochondrial ATP synthase g subunit family protein	S.X.	H.G.	Please select
0.16	16.7	1607361_at	CB978315	hypothetical protein LOC100255310	-	5e-4	At4g25130	peptide methionine sulfoxide reductase, putative	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
5.9	98.6	GSM287893	Pink soft berry C12 from plant 1 cluster distal position, biological rep 2	GSE11406	Expression data in individual grape berries during ripening initation
5.3	98.2	GSM287881	Green soft berry B10 from plant 1 cluster proximal position, biological rep 1	GSE11406	Expression data in individual grape berries during ripening initation
5.2	98.2	GSM287891	Pink soft berry B23 from plant 1 cluster proximal position, biological rep 2	GSE11406	Expression data in individual grape berries during ripening initation
4.9	97.9	GSM287889	Pink soft berry B8 from plant 1 cluster proximal position, biological rep 1	GSE11406	Expression data in individual grape berries during ripening initation
4.8	97.8	GSM287896	Pink soft berry C27 from plant 2 cluster distal position, biological rep 2	GSE11406	Expression data in individual grape berries during ripening initation
4.7	97.7	GSM287894	Pink soft berry C26 from plant 2 cluster proximal position, biological rep 2	GSE11406	Expression data in individual grape berries during ripening initation
4.5	97.5	GSM287887	Green soft berry C23 from plant 2 cluster distal position, biological rep 1	GSE11406	Expression data in individual grape berries during ripening initation
4.3	97.2	GSM287902	Red soft berry C30 from plant 2 cluster proximal position, biological rep 2	GSE11406	Expression data in individual grape berries during ripening initation
4.3	97.2	GSM287895	Pink soft berry B13 from plant 2 cluster distal position, biological rep 1	GSE11406	Expression data in individual grape berries during ripening initation
3.5	95.7	GSM287890	Pink soft berry C25 from plant 2 cluster proximal position, biological rep 1	GSE11406	Expression data in individual grape berries during ripening initation

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.04	6e-9	59	1615617_at	CF603834	hypothetical protein LOC100249849	-	2e+0	At2g05370	-	C.G.	S.X.	Please select
0.03	9e-8	56	1621034_at	CF406031	hypothetical protein LOC100244738 /// similar to phosphoenolpyruvate carboxykinase /// hypothetical protein LOC100257809	-	4e-110	At4g37870	PCK1 (PHOSPHOENOLPYRUVATE CARBOXYKINASE 1)	C.G.	S.X.	Please select
0.04	9e-8	56	1614910_at	CF604623	hypothetical protein LOC100262364	-	6e+0	At5g48580	FKBP15-2	C.G.	S.X.	Please select
0.05	9e-8	56	1613673_at	CF215004	hypothetical protein LOC100255721	-	3e-10	At5g09620	octicosapeptide/Phox/Bem1p (PB1) domain-containing protein	C.G.	S.X.	Please select
0.05	9e-8	56	1610641_s_at	CF607434	hypothetical protein LOC100245723	-	3e-1	At3g59370	unknown protein	C.G.	S.X.	Please select
0.04	4e-7	54	1621808_s_at	CF215238	hypothetical protein LOC100264533	-	2e-3	At4g37300	MEE59 (maternal effect embryo arrest 59)	C.G.	S.X.	Please select
0.04	4e-7	54	1621625_s_at	CF513375	hypothetical protein LOC100264067	-	5e-10	At4g22360	SWIB complex BAF60b domain-containing protein	C.G.	S.X.	Please select
0.04	4e-7	54	1617919_at	CF605842	hypothetical protein LOC100261876	-	2e+0	At4g26830	catalytic/ cation binding / hydrolase, hydrolyzing O-glycosyl compounds	C.G.	S.X.	Please select
0.02	4e-7	54	1613630_s_at	BQ794547	similar to HSC70-1 (heat shock cognate 70 kDa protein 1); ATP binding	-	0	At5g02500	HSC70-1 (HEAT SHOCK COGNATE PROTEIN 70-1)	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.09	3e-7	56	Arabidopsis thaliana	At1g12500	837807	phosphate translocator-related	F:organic anion transmembrane transporter activity;P:unknown;C:membrane;PMFOBA	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.17	1e-25	117	Glycine max	GmaAffx.86076.1.S1_at	CA800180	-	-	1e-23	At1g12500	phosphate translocator-related	C.G.	S.X.	Please select
0.05	5e-1	34	Hordeum vulgare	HX14H18r_at	HX14H18r	-	-	3e-1	At1g07880	ATMPK13	C.G.	S.X.	Please select
0.03	6e-1	36	Oryza sativa	Os01g0240800	9629.m01368	-	-	2e+0	At3g51440	strictosidine synthase family protein	C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.11	5e-22	105	Populus trichocarpa	PtpAffx.85250.2.S1_s_at	BU884104	hypothetical protein	-	1e-14	At1g12500	phosphate translocator-related	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.05	5e-6	52	Triticum aestivum	Ta.16933.1.S1_at	CA615409	-	-	5e+0	At3g44940	unknown protein	C.G.	S.X.	Please select
0.04	1e-1	36	Zea mays	ZmAffx.589.1.A1_at	AI715017	-	-	8e-1	At5g53880	unknown protein	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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