Gene omics information

Query gene ID	1619325_at
Gene name	hypothetical protein LOC100263459
Organism	Vitis vinifera

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.31	41.3	1619325_at	CF211836	hypothetical protein LOC100263459	-	6e-4	At3g14660	CYP72A13	S.X.	H.G.	Please select
0.61	83.2	1610344_at	BQ796295	hypothetical protein LOC100246080	-	9e-22	At1g21000	zinc-binding family protein	S.X.	H.G.	Please select
0.44	64.1	1612648_at	CD798203	hypothetical protein LOC100260257	-	3e-1	At1g42960	-	S.X.	H.G.	Please select
0.40	57.7	1608066_at	CB342796	hypothetical protein LOC100254977	-	5e-1	At5g43570	serine-type endopeptidase inhibitor	S.X.	H.G.	Please select
0.38	53.6	1608621_at	CB970971	hypothetical protein LOC100265589	-	4e-1	At1g27490	-	S.X.	H.G.	Please select
0.31	41.3	1608060_at	CF210997	-	-	2e-1	At2g01420	PIN4 (PIN-FORMED 4)	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
9.6	99.6	GSM322368	genotype: Incrocio Manzoni - disease type: Bois Noir infected - rep2	GSE12842	Gene expression in grapevine in response to Bois noir infection
6.4	98.9	GSM287866	Green hard berry B21 from plant 1 cluster proximal position, biological rep 1	GSE11406	Expression data in individual grape berries during ripening initation
5.9	98.6	GSM322367	genotype: Incrocio Manzoni - disease type: Bois Noir infected - rep1	GSE12842	Gene expression in grapevine in response to Bois noir infection
5.6	98.4	GSM287885	Green soft berry A22 from plant 2 cluster proximal position, biological rep 1	GSE11406	Expression data in individual grape berries during ripening initation
5.3	98.2	GSM322369	genotype: Incrocio Manzoni - disease type: Healthy - rep1	GSE12842	Gene expression in grapevine in response to Bois noir infection
5.2	98.2	GSM287882	Green soft berry A21 from plant 1 cluster proximal position, biological rep 2	GSE11406	Expression data in individual grape berries during ripening initation
4.6	97.6	GSM287881	Green soft berry B10 from plant 1 cluster proximal position, biological rep 1	GSE11406	Expression data in individual grape berries during ripening initation
4.6	97.6	GSM287879	Green hard berry C19 from plant 2 cluster distal position, biological rep 2	GSE11406	Expression data in individual grape berries during ripening initation
4.4	97.3	GSM287869	Green hard berry C3 from plant 1 cluster distal position, biological rep 1	GSE11406	Expression data in individual grape berries during ripening initation
4.4	97.3	GSM322363	genotype: Chardonnay - disease type: Bois Noir infected - rep3	GSE12842	Gene expression in grapevine in response to Bois noir infection

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.64	0	797	1609184_at	CB342124	hypothetical protein LOC100254366	-	7e-6	At3g14640	CYP72A10	C.G.	S.X.	Please select
0.50	2e-167	587	1617087_at	CF202027.1	hypothetical protein LOC100245388	-	5e+0	At5g45550	mob1/phocein family protein	C.G.	S.X.	Please select
0.43	5e-156	549	1608003_s_at	CF405160	hypothetical protein LOC100245388	-	4e+0	At5g63225	-	C.G.	S.X.	Please select
0.14	7e-38	157	1619578_at	CB342051	hypothetical protein LOC100254366 /// hypothetical protein LOC100258319 /// hypothetical protein LOC100267392	-	6e-3	At3g14620	CYP72A8	C.G.	S.X.	Please select
0.14	7e-38	157	1606919_at	CB342051	-	-	6e-3	At3g14620	CYP72A8	C.G.	S.X.	Please select
0.04	1e-8	59	1614070_at	CF214262	hypothetical protein LOC100247788	-	4e-3	At3g14630	CYP72A9	C.G.	S.X.	Please select
0.06	1e-8	59	1609166_at	CF517180	hypothetical protein LOC100249305	-	7e-3	At3g14630	CYP72A9	C.G.	S.X.	Please select
0.02	4e-2	38	1613981_at	CF514626	hypothetical protein LOC100264518	-	1e-4	At2g01130	ATP binding / ATP-dependent helicase/ RNA binding / double-stranded RNA binding / helicase/ nucleic acid binding	C.G.	S.X.	Please select
0.02	7e-1	34	1621367_at	CF210106	-	-	1e+0	At2g29440	ATGSTU6 (ARABIDOPSIS THALIANA GLUTATHIONE S-TRANSFERASE TAU 6)	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.09	6e-4	46	Arabidopsis thaliana	At3g14660	820694	CYP72A13	putative cytochrome P450	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.23	4e-9	63	Glycine max	Gma.16927.1.S1_at	BU547320	-	-	5e-1	At3g14680	CYP72A14	C.G.	S.X.	Please select
0.04	3e-1	36	Hordeum vulgare	Contig3160_at	Contig3160	-	-	1e-5	At3g14650	CYP72A11	C.G.	S.X.	Please select
0.06	2e-5	52	Oryza sativa	Os01g0627900	AB038597.1	-	Cytochrome P450 monooxygenase CYP72A5 (Fragment)	9e-4	At1g17060	CYP72C1 (CYTOCHROME P450 72C1)	C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.19	1e-14	81	Populus trichocarpa	Ptp.8143.1.S1_s_at	DN492537	cytochrome P450 /// cytochrome P450 /// cytochrome P450 /// cytochrome P450 /// cytochrome P450 /// cytochrome P450 /// cytochrome P450 /// hypothetical protein /// hypothetical protein	-	6e-4	At3g15460	brix domain-containing protein	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.05	4e-2	40	Triticum aestivum	Ta.5901.3.S1_x_at	CA609571	-	-	4e+0	At5g21010	ATBPM5 (BTB-POZ and MATH domain 5)	C.G.	S.X.	Please select
0.04	1e-6	54	Zea mays	Zm.8042.1.A1_at	CA404475	hypothetical protein LOC100217161	-	2e-1	At2g46960	CYP709B1	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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