CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID 1619323_at

Gene name hypothetical protein LOC100264304

Organism Vitis vinifera

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.91 98.8 1619323_at CF413821 hypothetical protein LOC100264304 - 7e+0 At5g37780 CAM1 (CALMODULIN 1) S.X. H.G.
0.73 90.8 1607019_at CB922746 hypothetical protein LOC100251940 - 3e+0 At2g41420 proline-rich family protein S.X. H.G.
0.67 87.9 1617668_at CF514659 hypothetical protein LOC100243346 - 5e-4 At4g11080 high mobility group (HMG1/2) family protein S.X. H.G.
0.50 72.7 1616463_at CF208407 hypothetical protein LOC100249922 - 4e-47 At3g20060 UBC19 (ubiquitin-conjugating enzyme19) S.X. H.G.
0.50 72.7 1621815_at CF213959 hypothetical protein LOC100261110 - 1e+0 At1g12630 DNA binding / transcription activator/ transcription factor S.X. H.G.
0.31 41.3 1611168_at CF208285 hypothetical protein LOC100247366 - 2e-139 At1g50010 TUA2 S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
8.7 99.5 GSM436354 Seyval (SV, Seyve Villard 5-276) LD, 15h 7 days - rep3 GSE17502 Photoperiod regulation of grape bud dormancy
6.4 98.9 GSM436388 V. riparia (VR, PI588259) LD, 15h 1 days - rep1 GSE17502 Photoperiod regulation of grape bud dormancy
6.2 98.8 GSM436389 V. riparia (VR, PI588259) LD, 15h 1 days - rep2 GSE17502 Photoperiod regulation of grape bud dormancy
5.4 98.3 GSM147717 Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation 46
5.1 98.1 GSM436380 Seyval (SV, Seyve Villard 5-276) SD, 13h 21 days - rep2 GSE17502 Photoperiod regulation of grape bud dormancy
5.0 98.0 GSM436377 Seyval (SV, Seyve Villard 5-276) SD, 13h 14 days - rep2 GSE17502 Photoperiod regulation of grape bud dormancy
4.7 97.7 GSM436381 Seyval (SV, Seyve Villard 5-276) SD, 13h 21 days - rep3 GSE17502 Photoperiod regulation of grape bud dormancy
4.4 97.3 GSM436379 Seyval (SV, Seyve Villard 5-276) SD, 13h 21 days - rep1 GSE17502 Photoperiod regulation of grape bud dormancy
4.4 97.3 GSM436368 Seyval (SV, Seyve Villard 5-276) SD, 13h 1 days - rep2 GSE17502 Photoperiod regulation of grape bud dormancy
4.2 97.1 GSM436418 V. riparia (VR, PI588259) SD, 13h 14 days - rep1 GSE17502 Photoperiod regulation of grape bud dormancy
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.01 5e-1 34 1618286_at BQ796746 hypothetical protein LOC100248027 - 5e-27 At3g14230 RAP2.2 C.G. S.X.
0.02 5e-1 34 1606722_at AF440310.1 actin depolymerizing factor - 1e-19 At2g31200 ADF6 (ACTIN DEPOLYMERIZING FACTOR 6) C.G. S.X.
0.02 2e+0 32 1622153_at CD010234 - - 1e+0 At5g48950 thioesterase family protein C.G. S.X.
0.02 2e+0 32 1622083_at BQ797832 hypothetical protein LOC100265922 - 5e-6 At4g34430 CHB3 C.G. S.X.
0.02 2e+0 32 1621962_at CA816867 hypothetical protein LOC100249521 - 4e-7 At3g02900 unknown protein C.G. S.X.
0.02 2e+0 32 1621267_at CD798748 hypothetical protein LOC100246712 - 5e+0 At5g57910 unknown protein C.G. S.X.
0.02 2e+0 32 1621207_at CB003279 - - 4e-19 At1g12250 thylakoid lumenal protein-related C.G. S.X.
0.02 2e+0 32 1621030_at CD713806 - - 8e-2 Atcg01310 - C.G. S.X.
0.02 2e+0 32 1618376_at CD010234 - - 1e+0 At5g48950 thioesterase family protein C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.03 7e+0 32 Arabidopsis thaliana At5g37780 833756 CAM1 (CALMODULIN 1) encodes a calmodulin that is involved in thigmomorphogenesis. Gene expression is rapidly induced upon a variety of abiotic stimuli, including water spray, subirrigation, wind, touch, wounding, or darkness. - - - C.G. S.X.
0.09 4e-2 40 Glycine max Gma.12539.1.S1_at BE346971 - - 6e-2 At5g42330 unknown protein C.G. S.X.
0.03 9e-1 34 Hordeum vulgare HVSMEg0001H24r2_s_at HVSMEg0001H24r2 - - 8e-1 At3g09890 ankyrin repeat family protein C.G. S.X.
0.03 4e+0 34 Oryza sativa OsAffx.26629.1.S1_at - - - 0 C.G. S.X.
0.02 3e+0 34 Populus trichocarpa PtpAffx.12086.2.A1_at BP933599 hypothetical protein - 7e-14 At5g19750 peroxisomal membrane 22 kDa family protein C.G. S.X.
0.03 8e-3 42 Triticum aestivum Ta.24301.1.A1_x_at CA722368 - - 4e+0 At5g59580 UGT76E1 (UDP-GLUCOSYL TRANSFERASE 76E1) C.G. S.X.
0.03 3e+0 32 Zea mays ZmAffx.66.1.A1_at AI665126 hypothetical protein LOC100279525 - 3e+0 At3g05460 sporozoite surface protein-related C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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