CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID 1619271_at

Gene name hypothetical protein LOC100247619

Organism Vitis vinifera

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.91 98.8 1619271_at CB981487 hypothetical protein LOC100247619 - 1e+0 At5g56100 glycine-rich protein / oleosin S.X. H.G.
0.91 98.8 1608839_at CF510749 hypothetical protein LOC100247619 - 2e-2 At5g25750 unknown protein S.X. H.G.
0.83 94.6 1616795_at CA813984 hypothetical LOC100248029 - 4e-9 At1g67230 LINC1 (LITTLE NUCLEI1) S.X. H.G.
0.77 92.3 1621467_at CA817542 hypothetical protein LOC100242259 - 3e-1 At2g30420 ETC2 S.X. H.G.
0.77 92.3 1611989_at CF209510 hypothetical protein LOC100244518 - 2e-89 At5g06600 UBP12 (UBIQUITIN-SPECIFIC PROTEASE 12) S.X. H.G.
0.67 87.9 1618431_at CA817390 hypothetical protein LOC100253034 - 3e-1 At5g13620 unknown protein S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
17.1 99.9 GSM147722 Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation 51
17.0 99.9 GSM147735 Vitis aestivalis 'Norton ' mock inoculated at 12 h post inoculation 64
11.4 99.7 GSM147737 Vitis aestivalis 'Norton ' mock inoculated at 48 h post inoculation 66
10.2 99.6 GSM147721 Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 4 h post inoculation 50
9.5 99.6 GSM147736 Vitis aestivalis 'Norton ' mock inoculated at 24 h post inoculation 65
9.2 99.5 GSM147725 Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 48 h post inoculation 54
8.9 99.5 GSM147740 Vitis aestivalis 'Norton ' mock inoculated at 8 h post inoculation 69
8.5 99.4 GSM147724 Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 24 h post inoculation 53
8.1 99.4 GSM147739 Vitis aestivalis 'Norton ' mock inoculated at 4 h post inoculation 68
8.0 99.3 GSM147734 Vitis aestivalis 'Norton ' mock inoculated at 8 h post inoculation 63
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.03 1e+0 32 1621840_at CB036000 - - 4e-7 At1g64890 integral membrane transporter family protein C.G. S.X.
0.03 1e+0 32 1621824_at CD011778 - - 4e-7 At2g35800 mitochondrial substrate carrier family protein C.G. S.X.
0.03 1e+0 32 1621421_at CF213136 hypothetical protein LOC100264035 - 1e-3 At5g42500 disease resistance-responsive family protein C.G. S.X.
0.02 1e+0 32 1621322_at CB973195 - - 2e-121 Atcg00580 - C.G. S.X.
0.03 1e+0 32 1620745_at CD714773 - - 8e-2 At5g62750 unknown protein C.G. S.X.
0.02 1e+0 32 1620213_at CB981229 hypothetical protein LOC100252268 - 5e-1 At1g13600 AtbZIP58 (Arabidopsis thaliana basic leucine-zipper 58) C.G. S.X.
0.03 1e+0 32 1619346_at BQ798913 hypothetical protein LOC100255325 - 3e-4 At3g44750 HDA3 (HISTONE DEACETYLASE 3) C.G. S.X.
0.02 1e+0 32 1618305_at CF208004 hypothetical protein LOC100256855 - 3e-73 At2g26990 FUS12 (FUSCA 12) C.G. S.X.
0.03 1e+0 32 1618056_at BM437711 hypothetical protein LOC100240796 - 4e-7 At1g64890 integral membrane transporter family protein C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.04 1e+0 34 Arabidopsis thaliana At5g56100 835709 glycine-rich protein / oleosin F:molecular_function unknown;P:lipid storage;C:monolayer-surrounded lipid storage body, integral to membrane, membrane;PB - - - C.G. S.X.
0.03 3e-1 36 Glycine max PsAffx.C115000051_at PsAffx.C115000051 - - 2e+0 At5g66490 unknown protein C.G. S.X.
0.05 1e-1 36 Hordeum vulgare HA27E07r_at HA27E07r - - 4e-1 At3g03660 WOX11 (WUSCHEL related homeobox 11) C.G. S.X.
0.04 2e+0 34 Oryza sativa OsAffx.25287.1.S1_at - - - 0 C.G. S.X.
0.04 3e-1 36 Populus trichocarpa PtpAffx.216189.1.S1_s_at pmrna30808 hypothetical protein - 7e-4 At4g39700 heavy-metal-associated domain-containing protein / copper chaperone (CCH)-related C.G. S.X.
0.03 1e+0 34 Triticum aestivum TaAffx.52296.1.S1_at CA709836 - - 1e+0 At4g01265 raffinose synthase family protein / seed imbibition protein-related C.G. S.X.
0.04 3e-2 38 Zea mays Zm.9830.2.A1_a_at BM341631 hypothetical protein LOC100193377 - 7e-2 At2g20613 unknown protein C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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