Gene omics information

Query gene ID 1619228_at
Gene name hypothetical protein LOC100248533
Organism Vitis vinifera


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.7088.61619228_atBQ794778hypothetical protein LOC100248533-8e-5At3g12360ITN1 (INCREASED TOLERANCE TO NACL)S.X.H.G.
0.6787.91612264_atCB349784--6e-19At5g52660myb family transcription factorS.X.H.G.
0.5577.31607813_atCF516148similar to oligopeptide transporter, putative-8e-9At1g72140proton-dependent oligopeptide transport (POT) family proteinS.X.H.G.
0.3650.71610112_atCF514110hypothetical protein LOC100251867-4e-67At1g70160unknown proteinS.X.H.G.
0.3345.71621250_atCF207474hypothetical protein LOC100266959-3e-51At5g16780DOT2 (DEFECTIVELY ORGANIZED TRIBUTARIES 2)S.X.H.G.
0.3243.11606469_atCB972245hypothetical protein LOC100261321-3e-60At4g02720unknown proteinS.X.H.G.
0.2225.61615672_atBQ800515hypothetical protein LOC100267237-2e-7At1g51200zinc finger (AN1-like) family proteinS.X.H.G.
0.1920.91607924_atCB971581hypothetical protein LOC100261557-3e-11At4g16580catalyticS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
2.893.4GSM436361Seyval (SV, Seyve Villard 5-276) LD, 15h 28 days - rep1GSE17502Photoperiod regulation of grape bud dormancy
2.491.3GSM322361genotype: Chardonnay - disease type: Bois Noir infected - rep1GSE12842Gene expression in grapevine in response to Bois noir infection
2.289.9GSM322363genotype: Chardonnay - disease type: Bois Noir infected - rep3GSE12842Gene expression in grapevine in response to Bois noir infection
2.289.9GSM436370Seyval (SV, Seyve Villard 5-276) SD, 13h 3 days - rep1GSE17502Photoperiod regulation of grape bud dormancy
2.189.1GSM436363Seyval (SV, Seyve Villard 5-276) LD, 15h 28 days - rep3GSE17502Photoperiod regulation of grape bud dormancy
2.189.1GSM436359Seyval (SV, Seyve Villard 5-276) LD, 15h 21 days - rep2GSE17502Photoperiod regulation of grape bud dormancy
2.189.1GSM436362Seyval (SV, Seyve Villard 5-276) LD, 15h 28 days - rep2GSE17502Photoperiod regulation of grape bud dormancy
2.088.2GSM322362genotype: Chardonnay - disease type: Bois Noir infected - rep2GSE12842Gene expression in grapevine in response to Bois noir infection
2.088.2GSM436382Seyval (SV, Seyve Villard 5-276) SD, 13h 28 days - rep1GSE17502Photoperiod regulation of grape bud dormancy
2.088.2GSM436381Seyval (SV, Seyve Villard 5-276) SD, 13h 21 days - rep3GSE17502Photoperiod regulation of grape bud dormancy
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.233e-231071616579_atCF514965hypothetical protein LOC100260111-6e-2At3g12360ITN1 (INCREASED TOLERANCE TO NACL)C.G.S.X.
0.039e-2361613143_atCF512079--4e+0At5g27889unknown proteinC.G.S.X.
0.021e+0321612559_atCB003638--5e+0At5g20670unknown proteinC.G.S.X.
0.031e+0321609969_atBQ795688hypothetical protein LOC100241124-3e+0At1g36675glycine-rich proteinC.G.S.X.
0.021e+0321608786_atCB003638--5e+0At5g20670unknown proteinC.G.S.X.
0.021e+0321608527_atCF515950hypothetical protein LOC100265888-1e-42At5g51970sorbitol dehydrogenase, putative / L-iditol 2-dehydrogenase, putativeC.G.S.X.
0.026e+0301622659_atCF405929hypothetical protein LOC100250457-3e-11At3g12050Aha1 domain-containing proteinC.G.S.X.
0.016e+0301622148_atCB003815hypothetical protein LOC100248028-4e-175At5g36790phosphoglycolate phosphatase, putativeC.G.S.X.
0.026e+0301621832_atCB837991--6e+0At3g26440unknown proteinC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.088e-548Arabidopsis thalianaAt3g12360820414ITN1 (INCREASED TOLERANCE TO NACL)Encodes a protein with an ankyrin motif and transmembrane domains that is involved in salt tolerance. Expressed throughout the plant and localized to the plasma membrane. Loss of function mutations show an increased tolerance to salt based on assaying seedling growth in the presence of salt. In the mutants, induction of genes required for production of reactive oxygen species is reduced suggesting that itn1 promotes ROS production.---C.G.S.X.
0.281e-757Glycine maxGma.3674.1.S1_atBI784836--3e-5At3g12360ITN1 (INCREASED TOLERANCE TO NACL)C.G.S.X.
0.086e-134Hordeum vulgarerbaal35m01_s_atrbaal35m01--2e-8At3g09550protein bindingC.G.S.X.
0.042e+034Oryza sativaOs07g0480000NM_187313.1--9e-1At1g55475unknown proteinC.G.S.X.
0.171e-1997Populus trichocarpaPtp.5094.1.S1_atBU814954hypothetical protein-5e-10At3g12360ITN1 (INCREASED TOLERANCE TO NACL)C.G.S.X.
0.055e-342Triticum aestivumTa.4059.1.S1_a_atBJ263315--6e-42At3g09550protein bindingC.G.S.X.
0.038e+030Zea maysZmAffx.1145.1.A1_atAW400072--1e-2At1g67570unknown proteinC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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