Gene omics information

Query gene ID 1619220_at
Gene name hypothetical protein LOC100257112
Organism Vitis vinifera


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.5679.41619220_atCA816725hypothetical protein LOC100257112-3e-89At1g23820SPDS1 (spermidine synthase 1)S.X.H.G.
0.6787.91613059_atCB982491hypothetical protein LOC100254296-7e-5At1g67785unknown proteinS.X.H.G.
0.5679.41606964_atCF415058hypothetical protein LOC100241624-2e-21At5g64130-S.X.H.G.
0.4361.51618980_atCB339254hypothetical protein LOC100250749-6e-6At4g37830cytochrome c oxidase-relatedS.X.H.G.
0.4260.11610451_s_atCD800289hypothetical protein LOC100245319-5e-9At3g01130unknown proteinS.X.H.G.
0.3650.71616782_s_atCB971306hypothetical protein LOC100251751-3e-8At5g49540unknown proteinS.X.H.G.
0.3141.31617530_s_atCA812136hypothetical protein LOC100258272-3e-4At3g12260complex 1 family protein / LVR family proteinS.X.H.G.
0.2937.71618371_atCA811058hypothetical protein LOC100248443-8e-5At2g37120DNA-binding S1FA family proteinS.X.H.G.
0.2734.01615356_atCF403414hypothetical protein LOC100267033-3e-5At3g53310transcriptional factor B3 family proteinS.X.H.G.
0.2530.51613072_atBQ798026similar to dicarboxylate/tricarboxylate carrier-6e-29At5g19760dicarboxylate/tricarboxylate carrier (DTC)S.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
3.796.2GSM299457C_i_rep2GSE11857Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genes
3.595.7GSM299456C_i_rep1GSE11857Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genes
3.294.9GSM299455C_ni_rep2GSE11857Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genes
3.194.6GSM299453B_i_rep1GSE11857Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genes
2.793.0GSM147681Vitis vinifera 'Cabernet sauvignon' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation10
2.692.5GSM147686Vitis vinifera 'Cabernet sauvignon' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation15
2.591.9GSM299462D_ni_rep1GSE11857Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genes
2.591.9GSM299459D_i_rep1GSE11857Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genes
2.591.9GSM299460D_i_rep2GSE11857Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genes
2.591.9GSM322367genotype: Incrocio Manzoni - disease type: Bois Noir infected - rep1GSE12842Gene expression in grapevine in response to Bois noir infection
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.084e-9611609980_a_atCA818363spermine synthase-4e+0At5g53120SPDS3 (SPERMIDINE SYNTHASE 3)C.G.S.X.
0.021e-2401621098_atCB975046hypothetical protein LOC100245221-8e-13At1g16900sugar binding / transferase, transferring glycosyl groupsC.G.S.X.
0.022e-1361614801_atCB978647hypothetical protein LOC100250155-1e-3At3g58570DEAD box RNA helicase, putativeC.G.S.X.
0.018e-1341619516_s_atCF209163hypothetical protein LOC100266996-3e-104At5g55190RAN3 (RAN GTPASE 3)C.G.S.X.
0.018e-1341619376_atCF204975.1--8e-61At5g55190RAN3 (RAN GTPASE 3)C.G.S.X.
0.028e-1341617243_atCB343510--1e+0At5g54855pollen Ole e 1 allergen and extensin family proteinC.G.S.X.
0.018e-1341615850_s_atBQ796206hypothetical protein LOC100258165-6e+0At5g05110cysteine protease inhibitor, putative / cystatin, putativeC.G.S.X.
0.018e-1341615212_atCF406027ripening-related protein-like-8e+0At5g64040PSANC.G.S.X.
0.028e-1341606758_atCF203561.1--1e+0At4g35210unknown proteinC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.473e-89329Arabidopsis thalianaAt1g23820838993SPDS1 (spermidine synthase 1)Spermidine synthase.---C.G.S.X.
0.231e-52208Glycine maxGmaAffx.90711.1.S1_atCF806436--2e-5At1g23820SPDS1 (spermidine synthase 1)C.G.S.X.
0.175e-34145Hordeum vulgareContig4624_atContig4624--1e-5At1g70310SPDS2 (spermidine synthase 2)C.G.S.X.
0.196e-37157Oryza sativaOs07g0408700AK099606.1-Spermidine synthase 2 (EC 2.5.1.16) (Putrescineaminopropyltransferase 2) (SPDSY 2)2e-10At1g70310SPDS2 (spermidine synthase 2)C.G.S.X.
0.530765Populus trichocarpaPtp.4460.1.S1_atCV253940hypothetical protein-2e-56At1g70310SPDS2 (spermidine synthase 2)C.G.S.X.
0.224e-33143Triticum aestivumTa.24743.2.S1_a_atCK205313--1e-1At1g23820SPDS1 (spermidine synthase 1)C.G.S.X.
0.191e-55216Zea maysZm.16536.2.A1_atCK347784hypothetical protein LOC100272866-6e-20At1g70310SPDS2 (spermidine synthase 2)C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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