Gene omics information

Query gene ID	1619190_at
Gene name	hypothetical protein LOC100254635
Organism	Vitis vinifera

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.75	91.3	1619190_at	CD720196	hypothetical protein LOC100254635	-	1e-7	At5g24760	alcohol dehydrogenase, putative	S.X.	H.G.	Please select
0.70	88.6	1617552_at	CF202269.1	hypothetical protein LOC100243817	-	4e-35	At4g35020	ARAC3 (ARABIDOPSIS RAC-LIKE 3)	S.X.	H.G.	Please select
0.53	75.2	1621770_at	CB978874	-	-	1e+0	At1g10030	ERG28 (Arabidopsis homolog of yeast ergosterol28)	S.X.	H.G.	Please select
0.52	73.9	1621651_at	CB345580	-	-	1e+0	At4g01310	ribosomal protein L5 family protein	S.X.	H.G.	Please select
0.50	72.7	1621992_s_at	BQ793824	hypothetical protein LOC100259183	-	2e-11	At5g66290	unknown protein	S.X.	H.G.	Please select
0.48	68.8	1619805_at	CB976900	similar to leucine-rich repeat protein-related	-	4e-9	At1g25570	leucine-rich repeat protein-related	S.X.	H.G.	Please select
0.46	66.5	1607612_at	CF202447.1	hypothetical protein LOC100262044	-	2e-12	At4g31300	PBA1	S.X.	H.G.	Please select
0.45	64.6	1609018_at	CF204139.1	-	-	1e+0	At3g44580	unknown protein	S.X.	H.G.	Please select
0.43	61.5	1618490_s_at	CF209633	hypothetical protein LOC100241704	-	4e-4	At2g29050	ATRBL1 (Arabidopsis thaliana Rhomboid-like 1)	S.X.	H.G.	Please select
0.42	60.1	1618976_at	CB973461	hypothetical protein LOC100249386	-	7e-2	At1g47790	F-box family protein	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
7.4	99.2	GSM147717	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation	46
7.2	99.1	GSM147718	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 24 h post inoculation	47
7.0	99.1	GSM147739	Vitis aestivalis 'Norton ' mock inoculated at 4 h post inoculation	68
5.8	98.6	GSM147711	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation	40
5.7	98.5	GSM147729	Vitis aestivalis 'Norton ' mock inoculated at 12 h post inoculation	58
5.4	98.3	GSM147721	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 4 h post inoculation	50
4.9	97.9	GSM147741	Vitis aestivalis 'Norton ' mock inoculated at 12 h post inoculation	70
4.7	97.7	GSM147723	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation	52
4.3	97.2	GSM147728	Vitis aestivalis 'Norton ' mock inoculated at 8 h post inoculation	57
4.0	96.7	GSM147712	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 24 h post inoculation	41

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.99	0	1965	1606537_at	CD720196	-	-	1e-7	At5g24760	alcohol dehydrogenase, putative	C.G.	S.X.	Please select
0.04	7e-4	44	1619873_at	CF404612	hypothetical protein LOC100264420	-	2e-9	At5g42250	alcohol dehydrogenase, putative	C.G.	S.X.	Please select
0.02	7e-1	34	1622229_at	CB002825	-	-	6e+0	At5g16640	pentatricopeptide (PPR) repeat-containing protein	C.G.	S.X.	Please select
0.01	7e-1	34	1619526_at	CF209847	hypothetical protein LOC100247097	-	1e-48	At3g11170	FAD7 (FATTY ACID DESATURASE 7)	C.G.	S.X.	Please select
0.02	7e-1	34	1618518_at	CB342656	hypothetical protein LOC100249603	-	2e+0	At5g17130	cysteine-type peptidase	C.G.	S.X.	Please select
0.02	7e-1	34	1618435_at	CB002825	-	-	6e+0	At5g16640	pentatricopeptide (PPR) repeat-containing protein	C.G.	S.X.	Please select
0.02	7e-1	34	1613185_at	CB980867	-	-	3e-1	At4g20760	short-chain dehydrogenase/reductase (SDR) family protein	C.G.	S.X.	Please select
0.02	7e-1	34	1609385_at	CB980801	hypothetical protein LOC100259057	-	3e-1	At4g20760	short-chain dehydrogenase/reductase (SDR) family protein	C.G.	S.X.	Please select
0.02	3e+0	32	1619741_at	CB339880	hypothetical protein LOC100259693	-	4e-50	At4g14550	IAA14 (INDOLE-3-ACETIC ACID INDUCIBLE 14)	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.16	1e-7	57	Arabidopsis thaliana	At5g24760	832545	alcohol dehydrogenase, putative	F:oxidoreductase activity, binding, catalytic activity, zinc ion binding;P:oxidation reduction, metabolic process;C:chloroplast;BOPFMAV	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.03	2e-4	48	Glycine max	Gma.4097.1.S1_at	AW350249	-	-	2e-45	At1g77120	ADH1 (ALCOHOL DEHYDROGENASE 1)	C.G.	S.X.	Please select
0.14	5e-15	81	Hordeum vulgare	Contig10788_at	Contig10788	-	-	6e-6	At5g24760	alcohol dehydrogenase, putative	C.G.	S.X.	Please select
0.13	2e-23	111	Oryza sativa	Os02g0637700	AK073849.1	-	Zinc-containing alcohol dehydrogenase superfamilyprotein	6e-11	At5g24760	alcohol dehydrogenase, putative	C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.47	1e-98	361	Populus trichocarpa	PtpAffx.134162.1.A1_at	CF232499	hypothetical protein	-	4e-29	At5g24760	alcohol dehydrogenase, putative	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.16	3e-30	133	Triticum aestivum	Ta.1744.1.S1_at	CD452643	-	-	6e-14	At5g24760	alcohol dehydrogenase, putative	C.G.	S.X.	Please select
0.19	3e-19	95	Zea mays	Zm.4885.1.S1_at	AW120276	hypothetical protein LOC100272578	-	3e-18	At5g24760	alcohol dehydrogenase, putative	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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