Gene omics information

Query gene ID 1619176_at
Gene name hypothetical protein LOC100262554
Organism Vitis vinifera


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.5980.61619176_atCF519067hypothetical protein LOC100262554-5e-61At1g36730eukaryotic translation initiation factor 5, putative / eIF-5, putativeS.X.H.G.
0.4767.71620788_atCF603169similar to ferrodoxin NADP oxidoreductase-2e-17At4g05390ATRFNR1 (ROOT FNR 1)S.X.H.G.
0.3345.71610578_atBG273711hypothetical protein LOC100247027-1e-13At3g53110LOS4 (LOW EXPRESSION OF OSMOTICALLY RESPONSIVE GENES 4)S.X.H.G.
0.3243.11618236_atCF210257hypothetical protein LOC100260911-4e-3At1g50350-S.X.H.G.
0.2937.71615136_atCF206458.1hypothetical protein LOC100255051-1e-68At1g10290ADL6 (DYNAMIN-LIKE PROTEIN 6)S.X.H.G.
0.1212.11607327_atCA817949hypothetical protein LOC100267395-8e-67At2g32260cholinephosphate cytidylyltransferase, putative / phosphorylcholine transferase, putative / CTP:phosphocholine cytidylyltransferase, putativeS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
7.299.1GSM287867Green hard berry C1 from plant 1 cluster proximal position, biological rep 2GSE11406Expression data in individual grape berries during ripening initation
3.896.4GSM287884Green soft berry C7 from plant 1 cluster distal position, biological rep 2GSE11406Expression data in individual grape berries during ripening initation
3.696.0GSM287898Red soft berry B14 from plant 1 cluster proximal position, biological rep 1GSE11406Expression data in individual grape berries during ripening initation
3.696.0GSM287885Green soft berry A22 from plant 2 cluster proximal position, biological rep 1GSE11406Expression data in individual grape berries during ripening initation
3.696.0GSM287883Green soft berry A23 from plant 1 cluster distal position, biological rep 1GSE11406Expression data in individual grape berries during ripening initation
3.595.7GSM287899Red soft berry C13 from plant 1 cluster proximal position, biological rep 2GSE11406Expression data in individual grape berries during ripening initation
3.495.5GSM287900Red soft berry C15 from plant 1 cluster distal position, biological rep 1GSE11406Expression data in individual grape berries during ripening initation
3.395.2GSM287902Red soft berry C30 from plant 2 cluster proximal position, biological rep 2GSE11406Expression data in individual grape berries during ripening initation
3.395.2GSM287890Pink soft berry C25 from plant 2 cluster proximal position, biological rep 1GSE11406Expression data in individual grape berries during ripening initation
3.294.9GSM287887Green soft berry C23 from plant 2 cluster distal position, biological rep 1GSE11406Expression data in individual grape berries during ripening initation
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.033e-1341622881_x_atCK136938.1--7e-5At2g39770CYT1 (CYTOKINESIS DEFECTIVE 1)C.G.S.X.
0.023e-1341622606_atCB910226GDP-D-mannose pyrophosphorylase-4e-157At2g39770CYT1 (CYTOKINESIS DEFECTIVE 1)C.G.S.X.
0.033e-1341616290_atCK136938.1--7e-5At2g39770CYT1 (CYTOKINESIS DEFECTIVE 1)C.G.S.X.
0.031e+0321614582_atBQ799084hypothetical protein LOC100265011-3e-4At1g08450CRT3 (CALRETICULIN 3)C.G.S.X.
0.031e+0321610817_atCF513296--2e+0At5g11830-C.G.S.X.
0.035e+0301622322_atCB977640--6e-12At4g18465RNA helicase, putativeC.G.S.X.
0.035e+0301621383_atCD718971--9e-8At2g45070SEC61 BETAC.G.S.X.
0.035e+0301621206_atCD717322--1e-2At1g22440alcohol dehydrogenase, putativeC.G.S.X.
0.035e+0301621156_atCD799492--4e-2At5g14040mitochondrial phosphate transporterC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.375e-61234Arabidopsis thalianaAt1g36730840582eukaryotic translation initiation factor 5, putative / eIF-5, putativeF:binding, translation initiation factor activity;P:translational initiation, regulation of translational initiation;C:unknown;OMFBPAV---C.G.S.X.
0.424e-53208Glycine maxGmaAffx.75978.3.S1_s_atCA937876--2e-35At1g36730eukaryotic translation initiation factor 5, putative / eIF-5, putativeC.G.S.X.
0.273e-42171Hordeum vulgareContig2883_s_atContig2883--5e-15At1g77840eukaryotic translation initiation factor 5, putative / eIF-5, putativeC.G.S.X.
0.277e-62238Oryza sativaOs09g0326900AK067685.1--7e-36At1g36730eukaryotic translation initiation factor 5, putative / eIF-5, putativeC.G.S.X.
0.284e-47188Populus trichocarpaPtpAffx.50347.1.S1_atCX172783hypothetical protein-2e-21At1g36730eukaryotic translation initiation factor 5, putative / eIF-5, putativeC.G.S.X.
0.247e-48190Triticum aestivumTa.3372.1.S1_atBJ275823Translation initiation factor eIF5-6e-27At1g36730eukaryotic translation initiation factor 5, putative / eIF-5, putativeC.G.S.X.
0.261e-53208Zea maysZm.97.1.S1_atBM073786Eukaryotic initiation factor-5-1e-24At1g36730eukaryotic translation initiation factor 5, putative / eIF-5, putativeC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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