Gene omics information

Query gene ID	1619157_at
Gene name	inward rectifying shaker-like K+ channel
Organism	Vitis vinifera

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.73	90.8	1619157_at	AF359521.1	inward rectifying shaker-like K+ channel	-	3e-66	At4g18290	KAT2 (POTASSIUM CHANNEL IN ARABIDOPSIS THALIANA 2)	S.X.	H.G.	Please select
0.57	79.8	1619741_at	CB339880	hypothetical protein LOC100259693	-	4e-50	At4g14550	IAA14 (INDOLE-3-ACETIC ACID INDUCIBLE 14)	S.X.	H.G.	Please select
0.48	68.8	1622209_at	CF608497	hypothetical protein LOC100254328	-	6e-39	At2g26580	YAB5 (YABBY5)	S.X.	H.G.	Please select
0.47	67.7	1606913_at	BQ792407	zeaxanthin epoxidase	-	3e-1	At5g65080	MAF5 (MADS AFFECTING FLOWERING 5)	S.X.	H.G.	Please select
0.44	64.1	1607624_at	BQ794859	hypothetical protein LOC100255131	-	6e-15	At5g12470	unknown protein	S.X.	H.G.	Please select
0.34	46.8	1618563_at	CA817076	hypothetical protein LOC100267134	-	3e-7	At2g41040	methyltransferase-related	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
11.0	99.7	GSM147743	Vitis aestivalis 'Norton ' mock inoculated at 48 h post inoculation	72
10.5	99.7	GSM147725	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 48 h post inoculation	54
8.9	99.5	GSM147730	Vitis aestivalis 'Norton ' mock inoculated at 24 h post inoculation	59
8.5	99.4	GSM147724	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 24 h post inoculation	53
7.0	99.1	GSM147737	Vitis aestivalis 'Norton ' mock inoculated at 48 h post inoculation	66
7.0	99.1	GSM147718	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 24 h post inoculation	47
6.9	99.1	GSM147731	Vitis aestivalis 'Norton ' mock inoculated at 48 h post inoculation	60
6.9	99.1	GSM147719	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 48 h post inoculation	48
6.2	98.8	GSM147742	Vitis aestivalis 'Norton ' mock inoculated at 24 h post inoculation	71
5.8	98.6	GSM147712	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 24 h post inoculation	41

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.01	2e-2	40	1612057_s_at	CF510567	-	-	3e-1	At5g46915	transcriptional factor B3 family protein	C.G.	S.X.	Please select
0.01	2e-2	40	1611559_at	CK138184.1	-	-	4e-1	At5g46915	transcriptional factor B3 family protein	C.G.	S.X.	Please select
0.01	9e-2	38	1618864_at	BQ800592	similar to ribosomal protein L10a	-	5e-56	At1g08360	60S ribosomal protein L10A (RPL10aA)	C.G.	S.X.	Please select
0.01	4e-1	36	1617644_at	CF515515	-	-	2e+1	At5g63230	-	C.G.	S.X.	Please select
0.01	1e+0	34	1618635_at	CB341972	-	-	2e+0	At5g45770	AtRLP55 (Receptor Like Protein 55)	C.G.	S.X.	Please select
0.01	1e+0	34	1613034_at	BQ797491	hypothetical protein LOC100248519	-	1e-1	At1g09870	histidine acid phosphatase family protein	C.G.	S.X.	Please select
0.01	1e+0	34	1612995_at	CD012259	-	-	4e-18	At3g13340	WD-40 repeat family protein	C.G.	S.X.	Please select
0.01	1e+0	34	1611172_at	CB003645	hypothetical protein LOC100261839	-	6e-14	At4g30960	SIP3 (SOS3-INTERACTING PROTEIN 3)	C.G.	S.X.	Please select
0.01	1e+0	34	1606583_at	CB979156	hypothetical protein LOC100257090	-	5e-14	At3g46590	TRFL1 (TRF-LIKE 1)	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.35	3e-66	254	Arabidopsis thaliana	At4g18290	827555	KAT2 (POTASSIUM CHANNEL IN ARABIDOPSIS THALIANA 2)	One of the four members of the Shaker family encoding guard cell potassium inward channels. Critical to stomatal opening induced by blue light. Critical to circadian rhythm of stomatal opening. Involved in plant development in response to high light intensity. Under high light intensity, the mutant plant produced less biomass compared to the wild type.	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.05	5e-10	67	Glycine max	GmaAffx.58721.1.S1_at	BF423813	-	-	3e-4	At4g18290	KAT2 (POTASSIUM CHANNEL IN ARABIDOPSIS THALIANA 2)	C.G.	S.X.	Please select
0.09	4e-11	69	Hordeum vulgare	Y09748_at	Y09748	potassium channel	-	3e-11	At5g46240	KAT1 (POTASSIUM CHANNEL IN ARABIDOPSIS THALIANA 1)	C.G.	S.X.	Please select
0.09	1e-11	73	Oryza sativa	Os.33370.1.S1_at	-	-	-	0			C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.47	8e-126	452	Populus trichocarpa	Ptp.120.1.S1_at	AJ344623.1	hypothetical protein	-	8e-45	At4g18290	KAT2 (POTASSIUM CHANNEL IN ARABIDOPSIS THALIANA 2)	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.03	2e-2	42	Triticum aestivum	Ta.25300.1.A1_at	CD454850	-	-	6e-4	At4g18290	KAT2 (POTASSIUM CHANNEL IN ARABIDOPSIS THALIANA 2)	C.G.	S.X.	Please select
0.20	1e-20	101	Zea mays	Zm.9559.1.S1_s_at	AY461584.1	inward rectifying shaker K+ channel	-	6e-21	At5g46240	KAT1 (POTASSIUM CHANNEL IN ARABIDOPSIS THALIANA 1)	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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