Gene omics information

Query gene ID	1619141_at
Gene name
Organism	Vitis vinifera

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.63	84.3	1619141_at	CD801026	-	-	2e-1	At5g42655	-	S.X.	H.G.	Please select
0.73	90.8	1613718_s_at	CF202933.1	hypothetical protein LOC100241422	-	7e+0	At5g11120	unknown protein	S.X.	H.G.	Please select
0.72	89.7	1620509_at	CF213694	hypothetical protein LOC100248585	-	2e-21	At4g39220	ATRER1A	S.X.	H.G.	Please select
0.67	87.9	1614948_at	CF518835	hypothetical protein LOC100265775	-	6e-61	At4g35360	pantothenate kinase family protein	S.X.	H.G.	Please select
0.61	83.2	1621653_s_at	CB974156	hypothetical protein LOC100261248	-	4e-17	At5g25757	unknown protein	S.X.	H.G.	Please select
0.60	81.9	1622052_s_at	CF213694	hypothetical protein LOC100248585	-	2e-21	At4g39220	ATRER1A	S.X.	H.G.	Please select
0.57	79.8	1607847_at	CF517305	-	-	6e-50	At2g32170	-	S.X.	H.G.	Please select
0.55	77.3	1611308_at	CF202925.1	hypothetical protein LOC100248182	-	6e-4	At3g47810	MAG1 (MAIGO 1)	S.X.	H.G.	Please select
0.48	68.8	1619577_at	CF213082	hypothetical protein LOC100266782	-	1e+0	At4g28950	ROP9 (RHO-RELATED PROTEIN FROM PLANTS 9)	S.X.	H.G.	Please select
0.43	61.5	1612915_at	CF212348	hypothetical protein LOC100247677	-	8e-115	At5g05780	RPN8A (RP NON-ATPASE SUBUNIT 8A)	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
6.4	98.9	GSM147740	Vitis aestivalis 'Norton ' mock inoculated at 8 h post inoculation	69
4.9	97.9	GSM147722	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation	51
4.7	97.7	GSM147739	Vitis aestivalis 'Norton ' mock inoculated at 4 h post inoculation	68
4.7	97.7	GSM147723	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation	52
4.4	97.3	GSM147721	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 4 h post inoculation	50
3.6	96.0	GSM147738	Vitis aestivalis 'Norton ' mock inoculated at 0 h post inoculation	67
3.6	96.0	GSM147743	Vitis aestivalis 'Norton ' mock inoculated at 48 h post inoculation	72
3.5	95.7	GSM147741	Vitis aestivalis 'Norton ' mock inoculated at 12 h post inoculation	70
3.3	95.2	GSM147728	Vitis aestivalis 'Norton ' mock inoculated at 8 h post inoculation	57
3.2	94.9	GSM147742	Vitis aestivalis 'Norton ' mock inoculated at 24 h post inoculation	71

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.03	6e-2	36	1608256_at	CF404926	hypothetical protein LOC100265659	-	3e-2	At5g23680	sterile alpha motif (SAM) domain-containing protein	C.G.	S.X.	Please select
0.03	2e-1	34	1618977_at	CB969477	hypothetical protein LOC100241190	-	4e-1	At4g18720	transcription elongation factor-related	C.G.	S.X.	Please select
0.02	2e-1	34	1614425_at	CB339536	hypothetical protein LOC100251424	-	8e-7	At3g02200	proteasome family protein	C.G.	S.X.	Please select
0.03	9e-1	32	1621270_at	CB971990	hypothetical protein LOC100252531	-	4e-4	At5g11590	TINY2 (TINY2)	C.G.	S.X.	Please select
0.03	9e-1	32	1615700_at	CA809560	similar to VPS24.1	-	2e-8	At5g22950	VPS24.1	C.G.	S.X.	Please select
0.03	9e-1	32	1615579_at	BQ796228	hypothetical protein LOC100266553	-	1e-13	At5g16240	acyl-(acyl-carrier-protein) desaturase, putative / stearoyl-ACP desaturase, putative	C.G.	S.X.	Please select
0.02	9e-1	32	1613611_at	CF209351	hypothetical protein LOC100252795	-	1e-11	At2g37650	scarecrow-like transcription factor 9 (SCL9)	C.G.	S.X.	Please select
0.02	9e-1	32	1608296_at	BQ799613	hypothetical protein LOC100242444	-	3e-127	At2g43710	SSI2	C.G.	S.X.	Please select
0.02	9e-1	32	1607700_at	CB345471	hypothetical protein LOC100260289	-	2e-3	At4g02160	unknown protein	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.05	2e-1	36	Arabidopsis thaliana	At5g42655	834274	-	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.05	3e-1	36	Glycine max	HgAffx.23024.1.S1_at	BF014825	-	-	2e-1	At4g02465	unknown protein	C.G.	S.X.	Please select
0.05	9e-2	36	Hordeum vulgare	HA28N02r_at	HA28N02r	-	-	1e-8	At2g23810	TET8 (TETRASPANIN8)	C.G.	S.X.	Please select
0.05	6e-3	42	Oryza sativa	Os10g0570200	AK063193.1	-	RIR1b protein precursor	4e+0	At4g00355	unknown protein	C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.05	1e+0	34	Populus trichocarpa	PtpAffx.210470.1.S1_s_at	pmrna20555	hypothetical protein	-	7e-1	At4g20260	DREPP plasma membrane polypeptide family protein	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.04	3e+0	32	Triticum aestivum	TaAffx.86910.1.S1_at	CA599015	-	-	7e-1	At1g62370	zinc finger (C3HC4-type RING finger) family protein	C.G.	S.X.	Please select
0.03	3e-1	34	Zea mays	Zm.17167.2.S1_at	AY106899.1	-	-	5e-1	At4g01895	systemic acquired resistance (SAR) regulator protein NIMIN-1-related	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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