Gene omics information

Query gene ID	1619034_at
Gene name	hypothetical protein LOC100264301
Organism	Vitis vinifera

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.73	90.8	1619034_at	CK136955.1	hypothetical protein LOC100264301	-	1e-3	At4g15393	CYP702A5	S.X.	H.G.	Please select
0.67	87.9	1607288_at	CK136901.1	-	-	8e+0	At4g30180	transcription factor/ transcription regulator	S.X.	H.G.	Please select
0.67	87.9	1611682_at	CB036119	-	-	3e-2	At1g69040	ACR4 (ACT REPEAT 4)	S.X.	H.G.	Please select
0.67	87.9	1609875_at	AY156047.1	protease inhibitor /// similar to protease inhibitor	-	3e+0	At5g41420	unknown protein	S.X.	H.G.	Please select
0.67	87.9	1611666_s_at	AY156047.1	protease inhibitor	-	3e+0	At5g41420	unknown protein	S.X.	H.G.	Please select
0.22	25.6	1615801_at	CK138174.1	-	-	4e-1	At1g65060	4CL3	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
30.4	100.0	GSM436425	V. riparia (VR, PI588259) SD, 13h 28 days - rep2	GSE17502	Photoperiod regulation of grape bud dormancy
24.4	100.0	GSM436424	V. riparia (VR, PI588259) SD, 13h 28 days - rep1	GSE17502	Photoperiod regulation of grape bud dormancy
20.7	99.9	GSM436408	V. riparia (VR, PI588259) LD, 15h 42 days - rep3	GSE17502	Photoperiod regulation of grape bud dormancy
19.2	99.9	GSM436426	V. riparia (VR, PI588259) SD, 13h 28 days - rep3	GSE17502	Photoperiod regulation of grape bud dormancy
14.2	99.9	GSM147717	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation	46
13.3	99.8	GSM147735	Vitis aestivalis 'Norton ' mock inoculated at 12 h post inoculation	64
13.2	99.8	GSM147716	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation	45
11.4	99.7	GSM436407	V. riparia (VR, PI588259) LD, 15h 42 days - rep2	GSE17502	Photoperiod regulation of grape bud dormancy
9.0	99.5	GSM147683	Vitis vinifera 'Cabernet sauvignon' infected w/ powdery mildew (Erysiphe necator) conidiospores 48 h post inoculation	12
7.3	99.2	GSM436406	V. riparia (VR, PI588259) LD, 15h 42 days - rep1	GSE17502	Photoperiod regulation of grape bud dormancy

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.02	1e+0	32	1622594_at	CF216086	hypothetical protein LOC100266248	-	2e-6	At1g68490	unknown protein	C.G.	S.X.	Please select
0.02	1e+0	32	1621347_at	CA817214	hypothetical protein LOC100248637	-	1e+0	At5g40630	ubiquitin family protein	C.G.	S.X.	Please select
0.02	1e+0	32	1620484_at	CD799248	-	-	3e+0	At4g11760	LCR17 (Low-molecular-weight cysteine-rich 17)	C.G.	S.X.	Please select
0.02	1e+0	32	1615650_at	CB976310	hypothetical protein LOC100267946	-	3e-2	At1g12740	CYP87A2	C.G.	S.X.	Please select
0.02	1e+0	32	1613150_at	CF213277	hypothetical protein LOC100254719	-	1e-68	At3g55280	RPL23AB (RIBOSOMAL PROTEIN L23AB)	C.G.	S.X.	Please select
0.02	1e+0	32	1607999_s_at	BQ797116	hypothetical protein LOC100244107	-	4e-64	At3g45310	cysteine proteinase, putative	C.G.	S.X.	Please select
0.02	6e+0	30	1622678_at	CB837718	-	-	1e-7	At3g17950	unknown protein	C.G.	S.X.	Please select
0.01	6e+0	30	1622221_at	AF021809.1	sucrose transporter-like	-	7e-79	At2g02860	SUT2 (SUCROSE TRANSPORTER 2)	C.G.	S.X.	Please select
0.03	6e+0	30	1621870_at	CF414005	hypothetical protein LOC100245239	-	9e-8	At3g20510	unknown protein	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.04	1e-3	44	Arabidopsis thaliana	At4g15393	827206	CYP702A5	a member of the cytochrome P450 gene family. molecular function unknown.	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.03	2e+0	34	Glycine max	GmaAffx.47793.1.A1_at	CD408658	-	-	1e+1	At3g32905	unknown protein	C.G.	S.X.	Please select
0.03	9e+0	30	Hordeum vulgare	Contig19031_at	Contig19031	-	-	9e-1	At1g60040	AGL49 (AGAMOUS-LIKE 49)	C.G.	S.X.	Please select
0.04	9e+0	32	Oryza sativa	Os07g0494500	NM_187339.1	-	-	1e-1	At3g42310	unknown protein	C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.05	2e+0	34	Populus trichocarpa	PtpAffx.215555.1.S1_at	pmrna29815	cytochrome P450	-	3e-3	At3g30290	CYP702A8	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.03	5e+0	32	Triticum aestivum	TaAffx.119572.1.S1_at	BJ267765	-	-	4e+0	At3g09390	MT2A (METALLOTHIONEIN 2A)	C.G.	S.X.	Please select
0.03	8e+0	30	Zea mays	ZmAffx.908.1.A1_at	AI770943	-	-	8e-1	At5g41720	-	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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