CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID 1619026_s_at

Gene name hypothetical protein LOC100265941

Organism Vitis vinifera

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.60 81.9 1619026_s_at CB349994 hypothetical protein LOC100265941 - 3e-10 At3g20800 rcd1-like cell differentiation protein, putative S.X. H.G.
0.67 87.9 1614075_at BQ796544 hypothetical protein LOC100249048 - 2e+0 At1g07410 ATRABA2B (ARABIDOPSIS RAB GTPASE HOMOLOG A2B) S.X. H.G.
0.59 80.6 1611366_at BQ800359 hypothetical protein LOC100246260 - 1e+0 At5g08185 MIR162A (MICRORNA 162A) S.X. H.G.
0.40 57.7 1618987_at CB974787 hypothetical protein LOC100267493 - 2e-1 At2g43795 unknown protein S.X. H.G.
0.29 37.7 1610132_s_at BQ796600 similar to oxysterol-binding family protein - 5e-32 At5g59420 ORP3C (OSBP(OXYSTEROL BINDING PROTEIN)-RELATED PROTEIN 3C) S.X. H.G.
0.17 18.2 1614948_at CF518835 hypothetical protein LOC100265775 - 6e-61 At4g35360 pantothenate kinase family protein S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
4.9 97.9 GSM287882 Green soft berry A21 from plant 1 cluster proximal position, biological rep 2 GSE11406 Expression data in individual grape berries during ripening initation
4.5 97.5 GSM147728 Vitis aestivalis 'Norton ' mock inoculated at 8 h post inoculation 57
4.3 97.2 GSM147726 Vitis aestivalis 'Norton ' mock inoculated at 0 h post inoculation 55
4.1 96.9 GSM147722 Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation 51
3.9 96.6 GSM147721 Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 4 h post inoculation 50
3.7 96.2 GSM147727 Vitis aestivalis 'Norton ' mock inoculated at 4 h post inoculation 56
3.7 96.2 GSM287883 Green soft berry A23 from plant 1 cluster distal position, biological rep 1 GSE11406 Expression data in individual grape berries during ripening initation
3.7 96.2 GSM287875 Green hard berry C17 from plant 2 cluster proximal position, biological rep 2 GSE11406 Expression data in individual grape berries during ripening initation
3.6 96.0 GSM147741 Vitis aestivalis 'Norton ' mock inoculated at 12 h post inoculation 70
3.5 95.7 GSM147717 Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation 46
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.67 0 789 1619040_at CF201881.1 hypothetical protein LOC100265941 - 3e-57 At3g20800 rcd1-like cell differentiation protein, putative C.G. S.X.
0.03 7e-2 36 1616735_at CF604749 hypothetical protein LOC100257315 - 1e+0 At5g50470 NF-YC7 (NUCLEAR FACTOR Y, SUBUNIT C7) C.G. S.X.
0.03 3e-1 34 1612520_at CF608548 hypothetical protein LOC100262310 - 2e-14 At4g34412 - C.G. S.X.
0.02 1e+0 32 1615633_at CA813996 hypothetical protein LOC100243547 - 1e-7 At2g03550 hydrolase C.G. S.X.
0.02 1e+0 32 1614818_at CB003857 - - 7e-3 At1g06790 RNA polymerase Rpb7 N-terminal domain-containing protein C.G. S.X.
0.03 1e+0 32 1612300_at CD719418 - - 3e-1 At2g01800 COP1-interacting protein-related C.G. S.X.
0.02 1e+0 32 1611079_at CB003857 - - 7e-3 At1g06790 RNA polymerase Rpb7 N-terminal domain-containing protein C.G. S.X.
0.03 1e+0 32 1610726_x_at CF202818.1 - - 3e-4 At5g52552 CPuORF14 (Conserved peptide upstream open reading frame 14) C.G. S.X.
0.03 1e+0 32 1608506_at CD719418 - - 3e-1 At2g01800 COP1-interacting protein-related C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.07 3e-10 65 Arabidopsis thaliana At3g20800 821628 rcd1-like cell differentiation protein, putative F:molecular_function unknown;P:multicellular organismal development;C:cellular_component unknown;MFOP - - - C.G. S.X.
0.20 8e-27 121 Glycine max Gma.4905.1.S1_a_at AW348478 - - 1e-79 At3g20800 rcd1-like cell differentiation protein, putative C.G. S.X.
0.04 8e+0 30 Hordeum vulgare EBpi01_SQ004_C23_at EBpi01_SQ004_C23 - - 9e+0 At5g46300 unknown protein C.G. S.X.
0.04 8e+0 32 Oryza sativa OsAffx.16869.1.A1_at - - - 0 C.G. S.X.
0.26 3e-23 109 Populus trichocarpa PtpAffx.4971.3.A1_a_at CV267331 hypothetical protein - 5e-57 At3g20800 rcd1-like cell differentiation protein, putative C.G. S.X.
0.03 4e+0 32 Triticum aestivum TaAffx.80236.1.S1_at CA699534 - - 4e+0 At3g18800 unknown protein C.G. S.X.
0.02 7e+0 30 Zea mays Zm.9189.1.A1_at BM267192 - - 9e-2 At1g44920 unknown protein C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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