CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID 1618942_at

Gene name

Organism Vitis vinifera

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.67 87.9 1618942_at CA817511 - - 2e-6 At3g54700 carbohydrate transmembrane transporter/ phosphate transmembrane transporter/ sugar:hydrogen symporter S.X. H.G.
0.67 87.9 1618508_at CF208698 hypothetical protein LOC100254705 /// hypothetical protein LOC100260176 /// hypothetical protein LOC100263586 /// hypothetical protein LOC100266529 - 4e+0 At2g18876 unknown protein S.X. H.G.
0.53 75.2 1610660_at CB008720 hypothetical LOC100263492 - 1e+0 At2g20700 unknown protein S.X. H.G.
0.50 72.7 1607656_at CF514698 hypothetical protein LOC100252782 - 2e+0 At4g16210 ECHIA (ENOYL-COA HYDRATASE/ISOMERASE A) S.X. H.G.
0.21 24.0 1607979_at BQ797675 hypothetical protein LOC100240913 - 5e-3 At2g19130 S-locus lectin protein kinase family protein S.X. H.G.
0.14 14.4 1619805_at CB976900 similar to leucine-rich repeat protein-related - 4e-9 At1g25570 leucine-rich repeat protein-related S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
9.0 99.5 GSM147735 Vitis aestivalis 'Norton ' mock inoculated at 12 h post inoculation 64
6.0 98.7 GSM147716 Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation 45
5.8 98.6 GSM147717 Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation 46
5.6 98.4 GSM147711 Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation 40
5.4 98.3 GSM147723 Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation 52
5.2 98.2 GSM147715 Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 4 h post inoculation 44
5.1 98.1 GSM147713 Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 48 h post inoculation 42
5.1 98.1 GSM147733 Vitis aestivalis 'Norton ' mock inoculateds at 4 h post inoculation 62
4.9 97.9 GSM147741 Vitis aestivalis 'Norton ' mock inoculated at 12 h post inoculation 70
4.8 97.8 GSM147729 Vitis aestivalis 'Norton ' mock inoculated at 12 h post inoculation 58
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.71 0 664 1613411_at CA818408 - - 7e-2 At3g47480 calcium-binding EF hand family protein C.G. S.X.
0.02 2e-3 42 1606831_at CA818428 hypothetical protein LOC100260960 - 2e-112 At5g61790 calnexin 1 (CNX1) C.G. S.X.
0.01 1e-1 36 1610222_at CF514091 hypothetical protein LOC100248061 - 2e-168 At2g20420 succinyl-CoA ligase (GDP-forming) beta-chain, mitochondrial, putative / succinyl-CoA synthetase, beta chain, putative / SCS-beta, putative C.G. S.X.
0.02 2e+0 32 1612732_at CD714809 - - 2e-25 At1g53400 unknown protein C.G. S.X.
0.03 2e+0 32 1611829_at CF404908 hypothetical protein LOC100263659 - 6e-2 At3g48880 F-box family protein C.G. S.X.
0.02 2e+0 32 1608957_at CD714809 hypothetical protein LOC100267634 - 2e-25 At1g53400 unknown protein C.G. S.X.
0.03 2e+0 32 1607736_at BQ799155 - - 8e-1 At3g12480 NF-YC11 (NUCLEAR FACTOR Y, SUBUNIT C11) C.G. S.X.
0.02 7e+0 30 1621979_at CB339366 hypothetical protein LOC100254010 - 7e-12 At1g62850 - C.G. S.X.
0.02 7e+0 30 1621827_at CF373383 similar to flowering locus C-like MADS-box protein - 4e-11 At2g45650 AGL6 (AGAMOUS-LIKE 6) C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.07 2e-6 54 Arabidopsis thaliana At3g54700 824635 carbohydrate transmembrane transporter/ phosphate transmembrane transporter/ sugar:hydrogen symporter F:phosphate transmembrane transporter activity, carbohydrate transmembrane transporter activity, sugar:hydrogen symporter activity;P:transport, phosphate transport;C:plasma membrane, membrane;BFMPOA - - - C.G. S.X.
0.07 1e-4 48 Glycine max Gma.5963.1.S1_at BG156858 - - 3e+0 At1g33970 avirulence-responsive protein, putative / avirulence induced gene protein, putative / AIG protein, putative C.G. S.X.
0.04 5e-5 48 Hordeum vulgare Contig7944_at Contig7944 - - 1e-1 At5g43370 APT1 (ARABIDOPSIS PHOSPHATE TRANSPORTER 1) C.G. S.X.
0.06 1e-14 81 Oryza sativa Os04g0186800 9632.m00954 - Transmembrane protein 8e-7 At5g43360 PHT3 (PHOSPHATE TRANSPORTER 3) C.G. S.X.
0.16 4e-11 69 Populus trichocarpa PtpAffx.62481.1.A1_s_at CV278325 high affinity inorganic phosphate transporter - 1e-1 At1g76430 phosphate transporter family protein C.G. S.X.
0.04 2e+0 34 Triticum aestivum TaAffx.85490.1.S1_at CA622285 - - 5e-6 At1g10300 GTP-binding protein-related C.G. S.X.
0.02 6e-1 34 Zea mays Zm.16247.1.S1_at AY181209.1 cold acclimation protein COR413-TM1 - 1e+1 At4g17480 palmitoyl protein thioesterase family protein C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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