Gene omics information

Query gene ID	1618863_at
Gene name	hypothetical protein LOC100254505
Organism	Vitis vinifera

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.67	87.9	1618863_at	CF208339	hypothetical protein LOC100254505	-	3e-9	At3g23640	HGL1 (heteroglycan glucosidase 1)	S.X.	H.G.	Please select
0.73	90.8	1613421_at	CD711287	hypothetical protein LOC100261079	-	2e-4	At4g32400	SHS1 (SODIUM HYPERSENSITIVE 1)	S.X.	H.G.	Please select
0.67	87.9	1615068_at	CF513427	hypothetical protein LOC100266680	-	3e-27	At5g02030	RPL (REPLUMLESS)	S.X.	H.G.	Please select
0.63	84.3	1614452_at	BQ798156	-	-	6e-3	At2g05900	SDG11 (SET DOMAIN-CONTAINING PROTEIN 11)	S.X.	H.G.	Please select
0.50	72.7	1620981_at	CB915724	hypothetical protein LOC100255721	-	1e+0	At3g15760	unknown protein	S.X.	H.G.	Please select
0.46	66.5	1607762_at	CF207334	hypothetical protein LOC100249697	-	6e-1	At3g44440	unknown protein	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
5.0	98.0	GSM436382	Seyval (SV, Seyve Villard 5-276) SD, 13h 28 days - rep1	GSE17502	Photoperiod regulation of grape bud dormancy
4.6	97.6	GSM436386	Seyval (SV, Seyve Villard 5-276) SD, 13h 42 days - rep2	GSE17502	Photoperiod regulation of grape bud dormancy
4.3	97.2	GSM436364	Seyval (SV, Seyve Villard 5-276) LD, 15h 42 days - rep1	GSE17502	Photoperiod regulation of grape bud dormancy
4.3	97.2	GSM436385	Seyval (SV, Seyve Villard 5-276) SD, 13h 42 days - rep1	GSE17502	Photoperiod regulation of grape bud dormancy
4.2	97.1	GSM436383	Seyval (SV, Seyve Villard 5-276) SD, 13h 28 days - rep2	GSE17502	Photoperiod regulation of grape bud dormancy
4.0	96.7	GSM436387	Seyval (SV, Seyve Villard 5-276) SD, 13h 42 days - rep3	GSE17502	Photoperiod regulation of grape bud dormancy
3.9	96.6	GSM436363	Seyval (SV, Seyve Villard 5-276) LD, 15h 28 days - rep3	GSE17502	Photoperiod regulation of grape bud dormancy
3.8	96.4	GSM436362	Seyval (SV, Seyve Villard 5-276) LD, 15h 28 days - rep2	GSE17502	Photoperiod regulation of grape bud dormancy
3.7	96.2	GSM436361	Seyval (SV, Seyve Villard 5-276) LD, 15h 28 days - rep1	GSE17502	Photoperiod regulation of grape bud dormancy
3.7	96.2	GSM436379	Seyval (SV, Seyve Villard 5-276) SD, 13h 21 days - rep1	GSE17502	Photoperiod regulation of grape bud dormancy

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.02	7e-1	34	1615985_at	CF516133	hypothetical protein LOC100264878	-	8e-17	At4g14560	IAA1 (INDOLE-3-ACETIC ACID INDUCIBLE)	C.G.	S.X.	Please select
0.02	7e-1	34	1610023_at	CF210818	hypothetical protein LOC100267903	-	6e-19	At4g36980	unknown protein	C.G.	S.X.	Please select
0.02	3e+0	32	1621574_at	CF511059	hypothetical protein LOC100241803	-	3e-2	At5g28290	ATNEK3 (NIMA-RELATED KINASE3)	C.G.	S.X.	Please select
0.01	3e+0	32	1612798_at	CB004353	-	-	2e+0	At5g01225	unknown protein	C.G.	S.X.	Please select
0.02	3e+0	32	1612311_at	CA812173	hypothetical protein LOC100250096	-	1e-47	At2g29630	THIC (ThiaminC)	C.G.	S.X.	Please select
0.03	3e+0	32	1611273_at	CF515691	hypothetical protein LOC100255128	-	1e-6	At2g30400	OFP2 (OVATE FAMILY PROTEIN 2)	C.G.	S.X.	Please select
0.02	3e+0	32	1609930_at	CB340826	hypothetical LOC100243959	-	3e-24	At5g11260	HY5 (ELONGATED HYPOCOTYL 5)	C.G.	S.X.	Please select
0.01	3e+0	32	1609354_at	CB350009	hypothetical protein LOC100257669	-	3e-8	At5g11480	GTP binding	C.G.	S.X.	Please select
0.01	3e+0	32	1609027_at	CB004353	hypothetical protein LOC100253650	-	2e+0	At5g01225	unknown protein	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.12	3e-9	63	Arabidopsis thaliana	At3g23640	821944	HGL1 (heteroglycan glucosidase 1)	F:hydrolase activity, hydrolyzing O-glycosyl compounds;P:carbohydrate metabolic process;C:chloroplast;BMFOPA	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.12	8e-7	56	Glycine max	Gma.4523.1.S1_at	CA799910	-	-	2e-1	At3g23640	HGL1 (heteroglycan glucosidase 1)	C.G.	S.X.	Please select
0.04	1e-3	44	Hordeum vulgare	Contig15078_at	Contig15078	-	-	5e+0	At5g59105	-	C.G.	S.X.	Please select
Os07g0420700	0.03	3e-10	Oryza sativa	Os02g0274100	AF442962.1	-	3-2-trans-enoyl-CoA isomerase (EC 5.3.3.8)	2e-9	At4g29010	AIM1 (ABNORMAL INFLORESCENCE MERISTEM)	C.G.	S.X.	Please select
0.44	7e-26	119	Populus trichocarpa	PtpAffx.17332.1.S1_s_at	CK097388	hypothetical protein	-	2e-34	At3g23640	HGL1 (heteroglycan glucosidase 1)	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.06	4e-2	40	Triticum aestivum	Ta.2245.1.A1_at	BJ321534	-	-	2e+0	At5g07410	pectinesterase family protein	C.G.	S.X.	Please select
0.03	1e-3	44	Zea mays	Zm.4161.1.A1_at	AY104817.1	-	-	6e-5	At3g23640	HGL1 (heteroglycan glucosidase 1)	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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